RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 HSPB2Q16082 182 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 DEPDC1Q5TB30 811 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 HLA-DQA1Q5Y7H0 255 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 ADGRD1Q6QNK2 874 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 C3orf62Q6ZUJ4 267 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 TAGAPQ8N103 731 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 LRRC25Q8N386 305 aaPredicted RBP14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 GOT1L1Q8NHS2 421 aaPredicted RBP14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 NEIL3Q8TAT5 605 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 RIT1Q92963 219 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 NINJ1Q92982 152 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 REPS1Q96D71 796 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 UBXN10Q96LJ8 280 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 CRIM1Q9NZV1 1036 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 PLEKHA6Q9Y2H5 1048 aa14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 CHCHD2Q9Y6H1 151 aaPredicted RBP14.55□□□□□ -0.08
CHMP4A-204ENST00000530996 INTS1Q8N201 2190 aaKnown RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 SETD2Q9BYW2 2564 aaPredicted RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 OR6C76A6NM76 312 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 SYCE1LA8MT33 242 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 TP53I11O14683 189 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 CTAG2O75638 210 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 DNASE1P24855 282 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 CRABP2P29373 138 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 STX2P32856 288 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 PEX19P40855 299 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 ASCL1P50553 236 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 WNT3P56703 355 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 RPS13P62277 151 aaKnown RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 DLG1Q12959 904 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 BIKQ13323 160 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 EBPQ15125 230 aaKnown RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 SPRED3Q2MJR0 410 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 KBTBD12Q3ZCT8 623 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 GRTP1Q5TC63 336 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 TMEM198Q66K66 360 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 TMEM64Q6YI46 380 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 ZCCHC7Q8N3Z6 543 aaKnown RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 ATOH8Q96SQ7 321 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 SH2D2AQ9NP31 389 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 QPCTLQ9NXS2 382 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 ST6GALNAC2Q9UJ37 374 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 EDARQ9UNE0 448 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 PCDHGA11Q9Y5H2 935 aa14.54□□□□□ -0.08
CHMP4A-204ENST00000530996 NF1P21359 2839 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 ZNF407Q9C0G0 2248 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 C2orf92A0A1B0GVN3 265 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 FAM187AA6NFU0 413 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 CAPN14A8MX76 684 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 EEDO75530 441 aaKnown RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 AIFM1O95831 613 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 GSTA2P09210 222 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 KRT15P19012 456 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 PIK3CBP42338 1070 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 TMED10P49755 219 aaKnown RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 DGKQP52824 942 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 SLC37A1P57057 533 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 E2F2Q14209 437 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 RPS6KA2Q15349 733 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 ACSF3Q4G176 576 aaPredicted RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 FLYWCH1Q4VC44 716 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 LYPD8Q6UX82 237 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 ISCA2Q86U28 154 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 NUDT13Q86X67 352 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 RELL2Q8NC24 303 aaPredicted RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 KCTD4Q8WVF5 259 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 MRRFQ96E11 262 aaKnown RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 HSPBAP1Q96EW2 488 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 RILPQ96NA2 401 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 FOXC2Q99958 501 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 SNX15Q9NRS6 342 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 IGSF5Q9NSI5 407 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 WHRNQ9P202 907 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 CNOT11Q9UKZ1 510 aaKnown RBP14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 CAMK2AQ9UQM7 478 aa14.53□□□□□ -0.08
CHMP4A-204ENST00000530996 A0A0A6YYD5 115 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 EEF1E1-BLOC1S5C9J1V9 151 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 EEF1E1O43324 174 aaKnown RBP14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 TMPRSS11DO60235 418 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 GPR75O95800 540 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 IL2RAP01589 272 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 GBAP04062 536 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 FAM58BPP0C7Q3 252 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 TACR1P25103 407 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 SSTR4P31391 388 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 NRG3P56975 720 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 FBXW4P57775 412 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 GPX6P59796 221 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 IRF9Q00978 393 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 C2orf54Q08AI8 447 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 DUSP8Q13202 625 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 NTRK2Q16620 822 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 PFKFB4Q16877 469 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 TBCELQ5QJ74 424 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 BICRALQ6AI39 1079 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 OR52E8Q6IFG1 317 aa14.52□□□□□ -0.09
CHMP4A-204ENST00000530996 MAATS1Q7Z4T9 603 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms