RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RNF175Q8N4F7 328 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ANKRD53Q8N9V6 530 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 LMNTD1Q8N9Z9 388 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TTC29Q8NA56 475 aaPredicted RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 ATG16L2Q8NAA4 619 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 IL17RCQ8NAC3 791 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 LINC01555Q8NAE3 123 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 AVL9Q8NBF6 648 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ZNF740Q8NDX6 193 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR2L5Q8NG80 312 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR2L3Q8NG85 312 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR56A1Q8NGH5 318 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR2A1Q8NGT9 310 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR14C36Q8NHC7 312 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 WDR48Q8TAF3 677 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 MIPOL1Q8TD10 442 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 CREB3L4Q8TEY5 395 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 FGF14Q92915 247 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TM4SF18Q96CE8 201 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ISOC1Q96CN7 298 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 NMD3Q96D46 503 aaKnown RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 SIPA1Q96FS4 1042 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 MPP4Q96JB8 637 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 WDR92Q96MX6 357 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 IL17FQ96PD4 163 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ZNF300Q96RE9 604 aaPredicted RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 NODALQ96S42 347 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 SLC38A3Q99624 504 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 MAPKAP1Q9BPZ7 522 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 BTBD2Q9BX70 525 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 LGR4Q9BXB1 951 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 PLA2G2FQ9BZM2 168 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OSGEPL1Q9H4B0 414 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 DUSP21Q9H596 190 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 EVA1AQ9H8M9 152 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TRIM45Q9H8W5 580 aaPredicted RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 GPN2Q9H9Y4 310 aaPredicted RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 ZNF556Q9HAH1 456 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 SMURF2Q9HAU4 748 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 BCL2L10Q9HD36 194 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 MRPS30Q9NP92 439 aaKnown RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 MBNL1Q9NR56 388 aaKnown RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 PLCXD1Q9NUJ7 323 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 GIMAP4Q9NUV9 329 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 EXD2Q9NVH0 621 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TRNAU1APQ9NX07 287 aaKnown RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 CALML5Q9NZT1 146 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 NDUFAF4Q9P032 175 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 PDP1Q9P0J1 537 aaPredicted RBP5.27□□□□□ -1.57
PCF11-205ENST00000530906 TAAR2Q9P1P5 351 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ABCG2Q9UNQ0 655 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ERVK-11Q9UQG0 969 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 SH2B3Q9UQQ2 575 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 OR1A2Q9Y585 309 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 PCDHGA8Q9Y5G5 932 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 KLK4Q9Y5K2 254 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ENTPD2Q9Y5L3 495 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 GMPPBQ9Y5P6 360 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 LYVE1Q9Y5Y7 322 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 ENPP4Q9Y6X5 453 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TICRRQ7Z2Z1 1910 aa5.27□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3DA0A087WVF3 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3IA0A087WXS9 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3EA0A087X179 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3KA0A087X1G2 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 A0A1W2PQF6 199 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 SH3D21A4FU49 640 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 LRIT2A6NDA9 550 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3FA6NER0 549 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 OR5K4A6NMS3 321 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 MYO1GB0I1T2 1018 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 C10orf142B7Z368 130 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3LB9A6J9 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 H3BSA7 217 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 H7BY64 318 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TNFRSF11BO00300 401 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 SLC1A7O00341 560 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 CASC3O15234 703 aaKnown RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 LATO43561 262 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 SEC24DO94855 1032 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 KLHL18O94889 574 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 KLF8O95600 359 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 ANGPTL1O95841 491 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBX6O95947 436 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 ADAP00813 363 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 IGLV3-19P01714 112 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 NTRK1P04629 796 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 TBC1D3HP0C7X1 549 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 ETFAP13804 333 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 ETS2P15036 469 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 EFNA1P20827 205 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 HIST1H1TP22492 207 aaPredicted RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 HNRNPA2B1P22626 353 aaKnown RBP5.26□□□□□ -1.57
PCF11-205ENST00000530906 RRM2P31350 389 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 SOAT1P35610 550 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 PIGAP37287 484 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 XCR1P46094 333 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 DAPP51397 102 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 CCR5P51681 352 aa5.26□□□□□ -1.57
PCF11-205ENST00000530906 MAPK10P53779 464 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms