RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 REEP4Q9H6H4 257 aa9.38□□□□□ -0.91
SF3B2-206ENST00000528302 EGLN3Q9H6Z9 239 aa9.38□□□□□ -0.91
SF3B2-206ENST00000528302 RYDENQ9NUL5 291 aaKnown RBP9.38□□□□□ -0.91
SF3B2-206ENST00000528302 CXXC1Q9P0U4 656 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-206ENST00000528302 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FAM240BA0A1B0GVZ2 78 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FAM172BPA6NC97 362 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C12orf71A8MTZ7 269 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FAM25AB3EWG3 89 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FAM25CB3EWG5 89 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FAM25GB3EWG6 89 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CATP04040 527 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 PEPDP12955 493 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CSTF2P33240 577 aaKnown RBP eCLIP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 RECQLP46063 649 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 HNMTP50135 292 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 DSTNP60981 165 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ZNF763Q0D2J5 394 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 KRR1Q13601 381 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 GRIN2CQ14957 1233 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 LARS2Q15031 903 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 GPAT3Q53EU6 434 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ANXA8L1Q5VT79 327 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 IQCHQ86VS3 1027 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 RASGEF1AQ8N9B8 481 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FRMD6Q96NE9 622 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 F2RL3Q96RI0 385 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 DCLRE1CQ96SD1 692 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 RSPO3Q9BXY4 272 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 UCK2Q9BZX2 261 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 FANCFQ9NPI8 374 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SEC14L3Q9UDX4 400 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SNX7Q9UNH6 387 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 MAU2Q9Y6X3 613 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ENPP4Q9Y6X5 453 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ANHXE9PGG2 379 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 KPNA3O00505 521 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SYPP08247 313 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C8orf89P0DMQ9 161 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 IL12RB1P42701 662 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CRYBB2P43320 205 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CSNK2BP67870 215 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C1DQ13901 141 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 GINS1Q14691 196 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SYPL1Q16563 259 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C22orf39Q6P5X5 142 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 TMEM150AQ86TG1 271 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 PHC2Q8IXK0 858 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C16orf78Q8WTQ4 265 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SLC38A5Q8WUX1 472 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ZNF480Q8WV37 535 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CRELD1Q96HD1 420 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 TMEM80Q96HE8 168 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CAPNS2Q96L46 248 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SLC6A18Q96N87 628 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 NLNQ9BYT8 704 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SRRQ9GZT4 340 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 OR2AG1Q9H205 316 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 GALNT9Q9HCQ5 603 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 TXNL4BQ9NX01 149 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 MAT2BQ9NZL9 334 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 MRPS7Q9Y2R9 242 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SCN3AQ9NY46 2000 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CACNA1IQ9P0X4 2223 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 TRAV6A0A075B6T7 132 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 B4DXG7 233 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 K7ESM1 405 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 EIF3FO00303 357 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 LEFTY1O75610 366 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ERAL1O75616 437 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 EIF2S1P05198 315 aaKnown RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ACRP10323 421 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ITGA2P17301 1181 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 XCR1P46094 333 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CTBP2P56545 445 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 PSPHP78330 225 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 HYAL2Q12891 473 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 CAMK2BQ13554 666 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 HEPACAMQ14CZ8 416 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ZNF791Q3KP31 576 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 WDR45BQ5MNZ6 344 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 LHX8Q68G74 356 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ASTLQ6HA08 431 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 ZNF461Q8TAF7 563 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SLC7A13Q8TCU3 470 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SMAP2Q8WU79 429 aaPredicted RBP9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SLC7A6Q92536 515 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 REPS1Q96D71 796 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 MIXL1Q9H2W2 232 aa9.37□□□□□ -0.91
SF3B2-206ENST00000528302 SPATA6Q9NWH7 488 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms