RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 CGB2Q6NT52 195 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 B3GNT7Q8NFL0 401 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 M1APQ8TC57 530 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 APOBEC4Q8WW27 367 aaKnown RBP17.49■□□□□ 0.39
PTPRK-218ENST00000525459 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
PTPRK-218ENST00000525459 IMMP1LQ96LU5 166 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 ZNF681Q96N22 645 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 BBS4Q96RK4 519 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 ZBTB18Q99592 522 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 BHLHE41Q9C0J9 482 aaPredicted RBP17.49■□□□□ 0.39
PTPRK-218ENST00000525459 RABEP2Q9H5N1 569 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■■■□□ 17.8
PTPRK-218ENST00000525459 SH3BP4Q9P0V3 963 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 COPS7AQ9UBW8 275 aa17.49■□□□□ 0.39
PTPRK-218ENST00000525459 G3BP2Q9UN86 482 aaKnown RBP17.49■□□□□ 0.39
PTPRK-218ENST00000525459 CPAMD8Q8IZJ3 1885 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 MYO1GB0I1T2 1018 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 C17orf105B2RV13 164 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ANKRD28O15084 1053 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 IFI6P09912 130 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 SOX8P57073 446 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 SLC26A5P58743 744 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 SRSF11Q05519 484 aaKnown RBP17.48■□□□□ 0.39
PTPRK-218ENST00000525459 DEFB109BQ30KR1 87 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 CPTPQ5TA50 214 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 IRAK1BP1Q5VVH5 260 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 BORAQ6PGQ7 559 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 GPR155Q7Z3F1 870 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 CPLX4Q7Z7G2 160 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 GALNT12Q8IXK2 581 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 MIER2Q8N344 545 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ZNF675Q8TD23 568 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 RIT1Q92963 219 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 UCN3Q969E3 161 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 THOC1Q96FV9 657 aaKnown RBP17.48■□□□□ 0.39
PTPRK-218ENST00000525459 FBXL20Q96IG2 436 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ZNF160Q9HCG1 818 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ACSS1Q9NUB1 689 aaPredicted RBP17.48■□□□□ 0.39
PTPRK-218ENST00000525459 KCNMB2Q9Y691 235 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ZFHX4Q86UP3 3567 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 MED13Q9UHV7 2174 aa17.48■□□□□ 0.39
PTPRK-218ENST00000525459 ARGFXA6NJG6 315 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 GABRR3A8MPY1 467 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 FRKP42685 505 aaPredicted RBP17.47■□□□□ 0.39
PTPRK-218ENST00000525459 BTBD16Q32M84 506 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 TMEM198Q66K66 360 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 JMJD6Q6NYC1 403 aaPredicted RBP17.47■□□□□ 0.39
PTPRK-218ENST00000525459 KBTBD2Q8IY47 623 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 OR8J2Q8NGG1 315 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 PTPMT1Q8WUK0 201 aaPredicted RBP17.47■□□□□ 0.39
PTPRK-218ENST00000525459 COQ8BQ96D53 544 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 VMP1Q96GC9 406 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 ING2Q9H160 280 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 PRORYQ9H606 182 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 CLMPQ9H6B4 373 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 MMP25Q9NPA2 562 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 IGHV3-20A0A0C4DH32 117 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 WASHC1A8K0Z3 465 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 SERPINA7P05543 415 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 FEN1P39748 380 aaKnown RBP17.47■□□□□ 0.39
PTPRK-218ENST00000525459 SEC24CP53992 1094 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 LRRC74AQ0VAA2 488 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 SQLEQ14534 574 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 MLC1Q15049 377 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 SPATA21Q7Z572 469 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 MTERF4Q7Z6M4 381 aaKnown RBP17.47■□□□□ 0.39
PTPRK-218ENST00000525459 KRTCAP2Q8N6L1 136 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 VPS37AQ8NEZ2 397 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 CXorf21Q9HAI6 301 aa17.47■□□□□ 0.39
PTPRK-218ENST00000525459 SHOX2O60902 331 aaPredicted RBP17.46■□□□□ 0.39
PTPRK-218ENST00000525459 SLC22A3O75751 556 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 NT5EP21589 574 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 KIR3DL1P43629 444 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 MAP4K2Q12851 820 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 VWA5B2Q8N398 1253 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 NFAM1Q8NET5 270 aaPredicted RBP17.46■□□□□ 0.39
PTPRK-218ENST00000525459 SLC2A12Q8TD20 617 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 MESP1Q9BRJ9 268 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 DUSP26Q9BV47 211 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 NEUROD4Q9HD90 331 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 RYDENQ9NUL5 291 aaKnown RBP17.46■□□□□ 0.39
PTPRK-218ENST00000525459 ADAM21Q9UKJ8 722 aa17.46■□□□□ 0.39
PTPRK-218ENST00000525459 USP24Q9UPU5 2620 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 A8MUA0 341 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 BCAS2O75934 225 aaPredicted RBP17.45■□□□□ 0.38
PTPRK-218ENST00000525459 CLCN2P51788 898 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 NCBP2P52298 156 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPRK-218ENST00000525459 RHDQ02161 417 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 PRICKLE4Q2TBC4 344 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 GALNT16Q8N428 558 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 OR7A2PQ8NGA2 310 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 OR1N1Q8NGS0 311 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 OR8K3Q8NH51 312 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 C10orf82Q8WW14 230 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 SEMA4CQ9C0C4 833 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 LHPPQ9H008 270 aa17.45■□□□□ 0.38
PTPRK-218ENST00000525459 EPN3Q9H201 632 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms