RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 FAM9CQ8IZT9 166 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 C4orf33Q8N1A6 199 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 PARP16Q8N5Y8 322 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 BANPQ8N9N5 519 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 COLGALT1Q8NBJ5 622 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 ATAD1Q8NBU5 361 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 CDC26Q8NHZ8 85 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 RAB3IL1Q8TBN0 382 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 TCP10LQ8TDR4 215 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 MYLPFQ96A32 169 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 HDAC11Q96DB2 347 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZC3HAV1LQ96H79 300 aaKnown RBP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 PCED1BQ96HM7 432 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF641Q96N77 438 aaPredicted RBP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 TSNARE1Q96NA8 513 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 OPALINQ96PE5 141 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 OR1F2PQ96R84 312 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 GAD1Q99259 594 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 TDRD1Q9BXT4 1180 aaKnown RBP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 GON7Q9BXV9 100 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 MRPS26Q9BYN8 205 aaKnown RBP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 ULBP1Q9BZM6 244 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 RAB6CQ9H0N0 254 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 SDHAF3Q9NRP4 125 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 ABCC13Q9NSE7 274 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 MIOSQ9NXC5 875 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 NDRG3Q9UGV2 375 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 FBXW11Q9UKB1 542 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 NUP50Q9UKX7 468 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 PADI3Q9ULW8 664 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 SNX7Q9UNH6 387 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 SNX8Q9Y5X2 465 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 HELZP42694 1942 aaKnown RBP3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 KIAA1671Q9BY89 1806 aa3.18□□□□□ -1.9
LINCR-0001-203ENST00000524047 LTBP2Q14767 1821 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SRCAPQ6ZRS2 3230 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 A0A087WYN8 130 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SAA2-SAA4A0A096LPE2 208 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ILVBLA1L0T0 632 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 MYBPHLA2RUH7 354 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 CASTOR2A6NHX0 329 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SDR42E2A6NKP2 422 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 YJEFN3A6XGL0 299 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TRIM49D1C9J1S8 452 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TRIM77I1YAP6 450 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF701M0R085 212 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 RNF103O00237 685 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 KPNA4O00629 521 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 COPEO14579 308 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 CLOCKO15516 846 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 LINC01565O15544 149 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 GRID2O43424 1007 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TSPAN3O60637 253 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 GLRA3O75311 464 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 AVILO75366 819 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SULT1C4O75897 302 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 B3GAT3O94766 335 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 APBB3O95704 486 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 POP4O95707 220 aaKnown RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 AP2A1O95782 977 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 PGK1P00558 417 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 IGLV3-25P01717 112 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 POLBP06746 335 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZCCHC18P0CG32 403 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SLC2A4P14672 509 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF8P17098 575 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ERCC2P18074 760 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SRD5A1P18405 259 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 CXCR2P25025 360 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 CD52P31358 61 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 FOXN2P32314 431 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 GARSP41250 739 aaKnown RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 NPY2RP49146 381 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 BLKP51451 505 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 STX1BP61266 288 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SP3Q02447 781 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 CREB5Q02930 508 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 POU3F1Q03052 451 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 PPARDQ03181 441 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 YWHAHQ04917 246 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 PRKCZQ05513 592 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 KDSRQ06136 332 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 GALNT2Q10471 571 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 DLG1Q12959 904 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 NME3Q13232 169 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 EIF4EBP2Q13542 120 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TDGQ13569 410 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 PRPSAP1Q14558 356 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 EFTUD2Q15029 972 aaKnown RBP eCLIP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TOMM20Q15388 145 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TSC22D1Q15714 1073 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 USP41Q3LFD5 358 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 ZNF672Q499Z4 452 aaPredicted RBP3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 TEX44Q53QW1 395 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 GRTP1Q5TC63 336 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 SYPL2Q5VXT5 272 aa3.17□□□□□ -1.9
LINCR-0001-203ENST00000524047 BSPRYQ5W0U4 402 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms