RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 A8MVM7 634 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 NPIPA3F8WFD2 350 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 H7C423 109 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 SLC1A7O00341 560 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ST8SIA3O43173 380 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PDGFBP01127 241 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 POLR2MP0CAP2 368 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 SP9P0CG40 484 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PDHBP11177 359 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 RBMS1P29558 406 aaKnown RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 CCND2P30279 289 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 KCNJ1P48048 391 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 VCPP55072 806 aaKnown RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 OR1D5P58170 312 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 CYCSP99999 105 aaKnown RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 SRSF9Q13242 221 aaKnown RBP eCLIP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 CDC37Q16543 378 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 DUSP5Q16690 384 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 HSDL1Q3SXM5 330 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ZNF542PQ5EBM4 170 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 NHSL2Q5HYW2 709 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 CELF3Q5SZQ8 465 aaKnown RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PRSS55Q6UWB4 352 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ADGRD2Q7Z7M1 963 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 LRRTM1Q86UE6 522 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 SERINC5Q86VE9 423 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 IQCA1Q86XH1 822 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 NHLRC2Q8NBF2 726 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 UXS1Q8NBZ7 420 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 NUP37Q8NFH4 326 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 OR4D10Q8NGI6 311 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PPTC7Q8NI37 304 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ESR2Q92731 530 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 MOCOSQ96EN8 888 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 SGF29Q96ES7 293 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 AGAP3Q96P47 875 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ZNF300Q96RE9 604 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 UBAC1Q9BSL1 405 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ALKBH7Q9BT30 221 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 FGFBP2Q9BYJ0 223 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 HOXD1Q9GZZ0 328 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 RNF41Q9H4P4 317 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 MED20Q9H944 212 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 RPF1Q9H9Y2 349 aaKnown RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 B3GAT2Q9NPZ5 323 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 DNAJB9Q9UBS3 223 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ARMCX3Q9UH62 379 aaPredicted RBP3.09□□□□□ -1.91
HDAC2-208ENST00000520746 ASIC3Q9UHC3 531 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 FBXL4Q9UKA2 621 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 PILRBQ9UKJ0 227 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 KLK4Q9Y5K2 254 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 MYO9BQ13459 2157 aa3.09□□□□□ -1.91
HDAC2-208ENST00000520746 REV3LO60673 3130 aa3.09□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF236Q9UL36 1845 aa3.09□□□□□ -1.92
HDAC2-208ENST00000520746 ZFHX2Q9C0A1 2572 aaPredicted RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 PRRC2BQ5JSZ5 2229 aaKnown RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 SIPA1L1O43166 1804 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 FRMPD3Q5JV73 1810 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CDK5RAP2Q96SN8 1893 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 A0A1W2PNU3 283 aaPredicted RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 ERICH2A1L162 156 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 KPNA7A9QM74 516 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 LOC730098B7Z3J9 87 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 RTCAO00442 366 aaKnown RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 PSMA7O14818 248 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 KIF5CO60282 957 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 SAP30O75446 220 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 SORBS2O94875 1100 aaKnown RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CXCL14O95715 111 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CHRNA1P02708 482 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 LGALS2P05162 132 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 TRIM49P0CI25 452 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 TRIM49CP0CI26 452 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 DLATP10515 647 aaKnown RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CD52P31358 61 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 HNF4AP41235 474 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 NPBWR1P48145 328 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 FOLH1Q04609 750 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 FAM189A2Q15884 450 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 QRICH1Q2TAL8 776 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 ZRANB3Q5FWF4 1079 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 PLPP4Q5VZY2 271 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 DHRS11Q6UWP2 260 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 ASCL5Q7RTU5 278 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 GPR141Q7Z602 305 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 C5orf24Q7Z6I8 188 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 ZER1Q7Z7L7 766 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CATSPERDQ86XM0 798 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 MEX3DQ86XN8 651 aaKnown RBP3.08□□□□□ -1.92
HDAC2-208ENST00000520746 CREBRFQ8IUR6 639 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 NKAIN3Q8N8D7 197 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 DNAJB3Q8WWF6 145 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 OMA1Q96E52 524 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 C18orf12Q96KH6 178 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 NSMCE3Q96MG7 304 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 TSSK2Q96PF2 358 aa3.08□□□□□ -1.92
HDAC2-208ENST00000520746 TRIM51Q9BSJ1 452 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms