RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SERINC4A6NH21 518 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 HS3ST1O14792 307 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 KLF4O43474 513 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 TMCC2O75069 709 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 RCBTB2O95199 551 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 C1QAP02745 245 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CATP04040 527 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 THBDP07204 575 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 F7P08709 466 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 SLC35G6P0C7Q6 338 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 SRD5A1P18405 259 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 PGAM1P18669 254 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 HRH2P25021 359 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CD79BP40259 229 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 HNF4AP41235 474 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 SKIV2L2P42285 1042 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 CDK9P50750 372 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 TBPL1P62380 186 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 RNF4P78317 190 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ASPHQ12797 758 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 TMEM249Q2WGJ8 235 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 EIPR1Q53HC9 387 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 PIGGQ5H8A4 983 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 STEAP4Q687X5 459 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CASC4Q6P4E1 433 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ZNF474Q6S9Z5 364 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 OPN5Q6U736 354 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 C12orf54Q6X4T0 127 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 BTLAQ7Z6A9 289 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CLNKQ7Z7G1 428 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ADGRE4PQ86SQ3 457 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 RELL1Q8IUW5 271 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 ZNF611Q8N823 705 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 PTPMT1Q8WUK0 201 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 ZNF669Q96BR6 464 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 LRRC39Q96DD0 335 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CFAP36Q96G28 342 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 ART5Q96L15 291 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 G6PC3Q9BUM1 346 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 SHARPINQ9H0F6 387 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 SPNS1Q9H2V7 528 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CDC42EP4Q9H3Q1 356 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 PIGMQ9H3S5 423 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 KLHL31Q9H511 634 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 VIPAS39Q9H9C1 493 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 SMYD2Q9NRG4 433 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CATSPERZQ9NTU4 200 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 NINJ2Q9NZG7 142 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 LPAR3Q9UBY5 353 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 PACSIN3Q9UKS6 424 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CNOT11Q9UKZ1 510 aaKnown RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 MMACHCQ9Y4U1 282 aa8.3□□□□□ -1.08
NUP54-211ENST00000512151 CHCHD2Q9Y6H1 151 aaPredicted RBP8.3□□□□□ -1.08
NUP54-211ENST00000512151 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 A0A1W2PNV4 684 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 LRRC14BA6NHZ5 514 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 GOLGA8KD6RF30 607 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 GOLGA8TH3BQL2 631 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 GFYI3L273 518 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 PSMD12O00232 456 aaPredicted RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 TRIM3O75382 744 aaPredicted RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 TRAPPC6AO75865 159 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 VAPBO95292 243 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 SERPIND1P05546 499 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 SOD3P08294 240 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 SMIM10L1P0DMW3 83 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 FMO4P31512 558 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 UGT2B10P36537 528 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 CDKN1AP38936 164 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 RPS4XP62701 263 aaKnown RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 BMPR2Q13873 1038 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 RUNX2Q13950 521 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 CRYMQ14894 314 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 ETFDHQ16134 617 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 NHSL2Q5HYW2 709 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 SPANXN3Q5MJ09 141 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 FNDC7Q5VTL7 733 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 ANKRD34AQ69YU3 496 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 BICRALQ6AI39 1079 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 TRMT10BQ6PF06 316 aaKnown RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 SH2D5Q6ZV89 423 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 OR10G3Q8NGC4 313 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 NT5CQ8TCD5 201 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 ZPLD1Q8TCW7 415 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 AENQ8WTP8 325 aaKnown RBP8.29□□□□□ -1.08
NUP54-211ENST00000512151 PYROXD1Q8WU10 500 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 ASB11Q8WXH4 323 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 STARD4Q96DR4 205 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 SMIM10Q96HG1 83 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 OR8D2Q9GZM6 311 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 UBQLN3Q9H347 655 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 ADAP2Q9NPF8 381 aa8.29□□□□□ -1.08
NUP54-211ENST00000512151 CCDC177Q9NQR7 707 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms