RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TRHRP34981 398 aaPredicted RBP12.97□□□□□ -0.33
DDX41-212ENST00000511040 SERPINB4P48594 390 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 SSR4P51571 173 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 HK2P52789 917 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 TRA2BP62995 288 aaKnown RBP12.97□□□□□ -0.33
DDX41-212ENST00000511040 DUSP2Q05923 314 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 BIKQ13323 160 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 MPP2Q14168 576 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 MAPKAPK3Q16644 382 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 TNFAIP8L3Q5GJ75 292 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 CES4AQ5XG92 561 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 KANK2Q63ZY3 851 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 RPUSD3Q6P087 351 aaKnown RBP12.97□□□□□ -0.33
DDX41-212ENST00000511040 ZNF227Q86WZ6 799 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 NUDCD3Q8IVD9 361 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 C9orf40Q8IXQ3 194 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 ARMC10Q8N2F6 343 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 KLHL29Q96CT2 875 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 FBXL20Q96IG2 436 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 TUBB1Q9H4B7 451 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 CXorf21Q9HAI6 301 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 AGPAT4Q9NRZ5 378 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 MYOTQ9UBF9 498 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 TRAF6Q9Y4K3 522 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 UNC79Q9P2D8 2635 aa12.97□□□□□ -0.33
DDX41-212ENST00000511040 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 RSL1D1O76021 490 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 OR6B1O95007 311 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 RASAL1O95294 804 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 CLPSP04118 112 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 SP1P08047 785 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 CT62P0C5K7 136 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 MYZAPP0CAP1 466 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 SOX3P41225 446 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 SPRED3Q2MJR0 410 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 EIF2S3LQ2VIR3 472 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 SH2D4BQ5SQS7 431 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 DDIASQ8IXT1 998 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 HORMAD2Q8N7B1 307 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 BCORP1Q8N888 145 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 ANKRD42Q8N9B4 389 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 ADCY4Q8NFM4 1077 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 ASB15Q8WXK1 588 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 EXOSC8Q96B26 276 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 C11orf24Q96F05 449 aaPredicted RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 PGM2Q96G03 612 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 SCMH1Q96GD3 660 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 ART5Q96L15 291 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 RASL10BQ96S79 203 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 BARD1Q99728 777 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 PFDN4Q9NQP4 134 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 OLAHQ9NV23 265 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 UTS2RQ9UKP6 389 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 ERVK-11Q9UQG0 969 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 YARS2Q9Y2Z4 477 aaKnown RBP12.96□□□□□ -0.33
DDX41-212ENST00000511040 CCL27Q9Y4X3 112 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 DNAJC15Q9Y5T4 150 aa12.96□□□□□ -0.33
DDX41-212ENST00000511040 TENM4Q6N022 2769 aa12.96□□□□□ -0.34
DDX41-212ENST00000511040 ANKUB1A6NFN9 424 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 GOLGA6L10A6NI86 522 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 SLC28A1O00337 649 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 RGS14O43566 566 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 SEC22BO75396 215 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 LYPLA1O75608 230 aaPredicted RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 WISP2O76076 250 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 CBX6O95503 412 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 MST1P26927 711 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 SLC37A1P57057 533 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 C2orf80Q0P641 193 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 LTB4RQ15722 352 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 CHI3L2Q15782 390 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 INAQ16352 499 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 PRSS53Q2L4Q9 553 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 UGT3A2Q3SY77 523 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 NOXRED1Q6NXP6 359 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 GALNT18Q6P9A2 607 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 FAM111BQ6SJ93 734 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 MDGA2Q7Z553 956 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.95□□□□□ -0.34
DDX41-212ENST00000511040 CROCCP2Q86T23 111 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 GALNT12Q8IXK2 581 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 OR5L2Q8NGL0 311 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 OR8K3Q8NH51 312 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
DDX41-212ENST00000511040 TWIST2Q8WVJ9 160 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms