RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 LONP2Q86WA8 852 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MMD2Q8IY49 270 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ZNF34Q8IZ26 560 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FAM89BQ8N5H3 189 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 BHLHE23Q8NDY6 225 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CCDC148Q8NFR7 591 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OR6M1Q8NGM8 313 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OR2T3Q8NH03 318 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SLC38A5Q8WUX1 472 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TCP11Q8WWU5 503 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SEPT8Q92599 483 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 EMG1Q92979 244 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FAM46BQ96A09 425 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 APOLD1Q96LR9 279 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CMKLR1Q99788 373 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 GAL3ST1Q99999 423 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RAB11FIP5Q9BXF6 653 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PUS3Q9BZE2 481 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CRNKL1Q9BZJ0 848 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 DCLK3Q9C098 648 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PRSS22Q9GZN4 317 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 C5orf66Q9H5L9 145 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 DCLRE1BQ9H816 532 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RNF121Q9H920 327 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 LPAR2Q9HBW0 351 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ZBTB20Q9HC78 741 aaPredicted RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SLC38A7Q9NVC3 462 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ECM29Q5VYK3 1845 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 A0A087X1B8 175 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 LOC100653049A0A140TA62 436 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RPS10-NUDT3A0A1W2PQS6 291 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 GSAPA4D1B5 854 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OR6C75A6NL08 312 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CHUKO15111 745 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OGTO15294 1046 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 LCMT2O60294 686 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 WDR1O75083 606 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ECI2O75521 394 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 KRT34O76011 436 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 WISP2O76076 250 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 S100A6P06703 90 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TMEM191BP0C7N4 346 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CEACAM1P13688 526 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 EFNA1P20827 205 aaPredicted RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SSTR1P30872 391 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 GDI1P31150 447 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TRIM23P36406 574 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ETV1P50549 477 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RPS8P62241 208 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 HERVK_113P63132 956 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ERVK-8P63133 956 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FKBP1BP68106 108 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CTAG1AP78358 180 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CBX1P83916 185 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MYL7Q01449 175 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ZNF91Q05481 1191 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ZNF155Q12901 538 aaPredicted RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ITPK1Q13572 414 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PTGR1Q14914 329 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RBBP5Q15291 538 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PPP1R7Q15435 360 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 KRT71Q3SY84 523 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MPPE1Q53F39 396 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FIP1L1Q6UN15 594 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SIGLEC15Q6ZMC9 328 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TMEM26Q6ZUK4 368 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ASB18Q6ZVZ8 466 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MRPL10Q7Z7H8 261 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PIP4P1Q86T03 277 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CBWD2Q8IUF1 395 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PGBD5Q8N414 524 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MARVELD2Q8N4S9 558 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FAM98AQ8NCA5 519 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OR52J3Q8NH60 311 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TRMT10AQ8TBZ6 339 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RND1Q92730 232 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 TXNDC15Q96J42 360 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 BTBD9Q96Q07 612 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 VPS35Q96QK1 796 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SECISBP2Q96T21 854 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 NDNQ99608 321 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 OMDQ99983 421 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MTG1Q9BT17 334 aaPredicted RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ERVK-6Q9BXR3 956 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 POLDIP3Q9BY77 421 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 VCX2Q9H322 139 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 DPEP3Q9H4B8 488 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 FN3KRPQ9HA64 309 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 RAVER2Q9HCJ3 691 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 APMAPQ9HDC9 416 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 MED4Q9NPJ6 270 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 DDX28Q9NUL7 540 aaKnown RBP2.04□□□□□ -2.08
PDE4D-218ENST00000509368 BARHL2Q9NY43 387 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 ERVK-18Q9QC07 812 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 SLC7A7Q9UM01 511 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 PLCL2Q9UPR0 1127 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 A0A1W2PP64 1363 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 CDHR2Q9BYE9 1310 aa2.04□□□□□ -2.08
PDE4D-218ENST00000509368 IGLV5-39A0A0G2JS06 123 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms