RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 ACTR6Q9GZN1 396 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 PCBD2Q9H0N5 130 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 METTL17Q9H7H0 456 aaPredicted RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 LRRC40Q9H9A6 602 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 TEX10Q9NXF1 929 aaPredicted RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 MOCS1Q9NZB8 636 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 VTI1BQ9UEU0 232 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 LCMT1Q9UIC8 334 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 AMFRQ9UKV5 643 aa6.49□□□□□ -1.37
VCAN-207ENST00000507162 MRPS33Q9Y291 106 aaKnown RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
VCAN-207ENST00000507162 TRBC2A0A5B9 178 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 SYCE3A1L190 88 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 MACROD2A1Z1Q3 448 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 EIF3FO00303 357 aaPredicted RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 SMAD9O15198 467 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 EMC8O43402 210 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 CTNSO60931 367 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 LDB3O75112 727 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 H2AFZP0C0S5 128 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 SMIM10L1P0DMW3 83 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 CD8BP10966 210 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 PAMP19021 973 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 TCEA1P23193 301 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 ZFP36P26651 326 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 ATP5DP30049 168 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 RPL22P35268 128 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 RAB38P57729 211 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 C21orf58P58505 322 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 FUT7Q11130 342 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 GPS1Q13098 491 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 DOC2AQ14183 400 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 GBX1Q14549 363 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 RBBP5Q15291 538 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 CARTPTQ16568 116 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 CTU2Q2VPK5 515 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 BBS9Q3SYG4 887 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 NCMAPQ5T1S8 102 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 AGAP6Q5VW22 663 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 TIGD3Q6B0B8 471 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 ANGPTL8Q6UXH0 198 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 RINLQ6ZS11 566 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 H2AFVQ71UI9 128 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 LRRC6Q86X45 466 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 C9orf40Q8IXQ3 194 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 ZNF595Q8IYB9 648 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 DND1Q8IYX4 353 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 ZNF619Q8N2I2 560 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 NUBPLQ8TB37 319 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 CTNNBL1Q8WYA6 563 aaPredicted RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 FIG4Q92562 907 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 RHBDF1Q96CC6 855 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 SMIM10Q96HG1 83 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 FAM118BQ9BPY3 351 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 RBM4Q9BWF3 364 aaKnown RBP6.48□□□□□ -1.37
VCAN-207ENST00000507162 FAIMQ9NVQ4 179 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 FETUBQ9UGM5 382 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 ZFP69BQ9UJL9 534 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 DLGAP4Q9Y2H0 992 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 IKBKGQ9Y6K9 419 aa6.48□□□□□ -1.37
VCAN-207ENST00000507162 PLCE1Q9P212 2302 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 ESYT3A0FGR9 886 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CTAGE15A4D2H0 777 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 LRRC10BA6NIK2 292 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CAPN14A8MX76 684 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 C4orf51C9J302 202 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 E5RI56 91 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CDC7O00311 574 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 RAMP1O60894 148 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 LY6HO94772 140 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 NPPBP16860 134 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 RPS3P23396 243 aaKnown RBP eCLIP6.47□□□□□ -1.37
VCAN-207ENST00000507162 ADRA1DP25100 572 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CASP3P42574 277 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 SCTRP47872 440 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 LHX2P50458 406 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 EIF3EP60228 445 aaKnown RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 CUL1Q13616 776 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 SETDB1Q15047 1291 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 NTRK2Q16620 822 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 PARP6Q2NL67 630 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 LRRC38Q5VT99 294 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 UBE2R2Q712K3 238 aaPredicted RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 SLC29A4Q7RTT9 530 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 ATG4DQ86TL0 474 aaPredicted RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 CTAGE6Q86UF2 777 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CDKL3Q8IVW4 592 aaPredicted RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 UBQLNLQ8IYU4 475 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 PRELID2Q8N945 189 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 SLC35G2Q8TBE7 412 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 SPPL2AQ8TCT8 520 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 ASB11Q8WXH4 323 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 MRPL24Q96A35 216 aaKnown RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 PPWD1Q96BP3 646 aaKnown RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 CTHRC1Q96CG8 243 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 BIRC8Q96P09 236 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CSF3RQ99062 836 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 PACSIN1Q9BY11 444 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 NGBQ9NPG2 151 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms