RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TEX10Q9NXF1 929 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 NLGN3Q9NZ94 848 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 THEGQ9P2T0 379 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 KLK11Q9UBX7 282 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 CLIP2Q9UDT6 1046 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 ASIC3Q9UHC3 531 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 PSORS1C1Q9UIG5 152 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 PILRAQ9UKJ1 303 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SNX6Q9UNH7 406 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 EXOC6BQ9Y2D4 811 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MRPS7Q9Y2R9 242 aaKnown RBP2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 SH3GLB1Q9Y371 365 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 WIPI2Q9Y4P8 454 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 MYH15Q9Y2K3 1946 aa2.05□□□□□ -2.08
HMGB1P35-201ENST00000503360 LOC105371242A0A075B767 164 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 IQCMA0A1B0GVH7 501 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM129A0AVI4 362 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 MEX3AA1L020 520 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 NDUFAF8A1L188 74 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ANHXE9PGG2 379 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 G3V2L1 256 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 K7EQD1 137 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CXCL11O14625 94 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CHUKO15111 745 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 MAGEB3O15480 346 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 P2RX6O15547 441 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PSMD3O43242 534 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 B4GAT1O43505 415 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GMNNO75496 209 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 MTRF1O75570 445 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR6B1O95007 311 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 UBE4BO95155 1302 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PRAMEF12O95522 483 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PCCBP05166 539 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PGK2P07205 417 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CHRNGP07510 517 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GSTA2P09210 222 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 B4GALT1P15291 398 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 DPEP1P16444 411 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 HNRNPA2B1P22626 353 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 EDNRAP25101 427 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMOD1P28289 359 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PKLRP30613 574 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GDI1P31150 447 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 KDRP35968 1356 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 MTIF2P46199 727 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PITPNBP48739 271 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TRPC1P48995 793 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM50BP56557 158 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 BACE1P56817 501 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GSCP56915 257 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 KRTAP12-2P59991 146 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 IL24Q13007 206 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PDZK1IP1Q13113 114 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF177Q13360 481 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 RAPSNQ13702 412 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PDE7AQ13946 482 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 FASTKD3Q14CZ7 662 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPHARQ15513 63 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 IMMTQ16891 758 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 SHROOM1Q2M3G4 852 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 EPC2Q52LR7 807 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TAF1BQ53T94 588 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CFAP157Q5JU67 520 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 SPATA46Q5T0L3 261 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PLPP4Q5VZY2 271 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 SNRNP48Q6IEG0 339 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR6B2Q6IFH4 312 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TRIM65Q6PJ69 517 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 LCLAT1Q6UWP7 414 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 WDR88Q6ZMY6 472 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF497Q6ZNH5 498 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 DHX29Q7Z478 1369 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 VASH2Q86V25 355 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CDH26Q8IXH8 852 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 METTL4Q8N3J2 472 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 BANPQ8N9N5 519 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 AQP11Q8NBQ7 271 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TRPV3Q8NET8 790 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 TMEM185AQ8NFB2 350 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR9Q2Q8NGE9 314 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR52B6Q8NGF0 335 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR56B2PQ8NGI1 322 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR56B1Q8NGI3 324 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR10G7Q8NGN6 311 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 OR5M9Q8NGP3 310 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 C11orf45Q8TAV5 145 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GANCQ8TET4 914 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 RNF139Q8WU17 664 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 HAS2Q92819 552 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GUCD1Q96NT3 240 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 AGAP3Q96P47 875 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 AGAP4Q96P64 663 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ERGIC2Q96RQ1 377 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 PLIN2Q99541 437 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 GPA33Q99795 319 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 DDX50Q9BQ39 737 aaKnown RBP2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 ZNF577Q9BSK1 485 aa2.04□□□□□ -2.08
HMGB1P35-201ENST00000503360 CCM2Q9BSQ5 444 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms