RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 EIPR1Q53HC9 387 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 CT45A2Q5DJT8 189 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF506Q5JVG8 444 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 TCHHL1Q5QJ38 904 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF774Q6NX45 483 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 CWC27Q6UX04 472 aaKnown RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 APOOLQ6UXV4 268 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 SERPINA12Q8IW75 414 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 PHC2Q8IXK0 858 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 RTL3Q8N8U3 475 aaKnown RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 NEK11Q8NG66 645 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 OR1K1Q8NGR3 316 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 OR4L1Q8NH43 312 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 SNX21Q969T3 373 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 C11orf52Q96A22 123 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 COG3Q96JB2 828 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 NAP1L3Q99457 506 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 MRPL9Q9BYD2 267 aaKnown RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ZDHHC6Q9H6R6 413 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 GNB4Q9HAV0 340 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 SLC25A19Q9HC21 320 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ABCC13Q9NSE7 274 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 DDX28Q9NUL7 540 aaKnown RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ACOXLQ9NUZ1 547 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ABCD2Q9UBJ2 740 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 COPS7AQ9UBW8 275 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 NARFQ9UHQ1 456 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 FOXA2Q9Y261 457 aaPredicted RBP2.61□□□□□ -1.99
PSPC1-205ENST00000497722 AFF2P51816 1311 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 SALL1Q9NSC2 1324 aa2.61□□□□□ -1.99
PSPC1-205ENST00000497722 ADAMTS9Q9P2N4 1935 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TRBV5-4A0A0C4DH59 114 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TRABD2BA6NFA1 517 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 DDX39AO00148 427 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CHEK1O14757 476 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 KERAO60938 352 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CSDE1O75534 798 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 NUDT14O95848 222 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 MELTFP08582 738 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 IL4RP24394 825 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 OR1D2P34982 312 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ATP6V1E1P36543 226 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CASP3P42574 277 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 NT5C2P49902 561 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 SLC12A3P55017 1021 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CBX3Q13185 183 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 C15orf32Q32M92 178 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 SLC22A6Q4U2R8 563 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 SLC25A30Q5SVS4 291 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 HIST2H2AA3Q6FI13 130 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CDC42EP5Q6NZY7 148 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 REG3GQ6UW15 175 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CEACAM19Q7Z692 300 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ADCK1Q86TW2 530 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 LUZP1Q86V48 1076 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 HIPK1Q86Z02 1210 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ERC1Q8IUD2 1116 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 WDR49Q8IV35 697 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 PEX5LQ8IYB4 626 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ARL14Q8N4G2 192 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 SIDT2Q8NBJ9 832 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 SUMF1Q8NBK3 374 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 RDH11Q8TC12 318 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 AGAP11Q8TF27 550 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 BCL2L2Q92843 193 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 EPSTI1Q96J88 318 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF560Q96MR9 790 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 CCDC28BQ9BUN5 200 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 NUSAP1Q9BXS6 441 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TEX13AQ9BXU3 409 aaPredicted RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TSPYL1Q9H0U9 437 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TRPV6Q9H1D0 765 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 MID1IP1Q9NPA3 183 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 MIS18AQ9NYP9 233 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 DIMT1Q9UNQ2 313 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 ENTPD4Q9Y227 616 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 TDRKHQ9Y2W6 561 aaKnown RBP2.6□□□□□ -1.99
PSPC1-205ENST00000497722 KIF7Q2M1P5 1343 aa2.6□□□□□ -1.99
PSPC1-205ENST00000497722 AGRNO00468 2067 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 SH3PXD2BA1X283 911 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 C5orf51A6NDU8 294 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 TRIM64A6NGJ6 449 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 TRIM64BA6NI03 449 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CCDC69A6NI79 296 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF724A8MTY0 619 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 ZNF487B1APH4 448 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 K7EQG2 157 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 OR6B1O95007 311 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 SERPINF2P08697 491 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 HIST1H2AGP0C0S8 130 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CYP3A5P20815 502 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 MTIF2P46199 727 aaKnown RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 GSK3BP49841 420 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 LIMK2P53671 638 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 UCP2P55851 309 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CCZ1BP86790 482 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 CCZ1P86791 482 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 MFGE8Q08431 387 aaPredicted RBP2.59□□□□□ -1.99
PSPC1-205ENST00000497722 BNIP1Q12981 228 aa2.59□□□□□ -1.99
PSPC1-205ENST00000497722 NME3Q13232 169 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms