RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PAPOLGQ9BWT3 736 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 PDGFDQ9GZP0 370 aaPredicted RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CRISPLD1Q9H336 500 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 SLC6A13Q9NSD5 602 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 GDE1Q9NZC3 331 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 AFF4Q9UHB7 1163 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 POLR3HQ9Y535 204 aaPredicted RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 LACTBL1A8MY62 500 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 FGF10O15520 208 aaPredicted RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 LDB2O43679 373 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CRCPO75575 148 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 HIST1H2ABP04908 130 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 SAGP10523 405 aaPredicted RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 JUPP14923 745 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 S100A11P31949 105 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 SOX3P41225 446 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 ACTR1BP42025 376 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 STC1P52823 247 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CRISP1P54107 249 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CD81P60033 236 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CRYZQ08257 329 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 GTF2H3Q13889 308 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 BOP1Q14137 746 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 FGL2Q14314 439 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 PTPRCAPQ14761 206 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 PTGR1Q14914 329 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 SEC23BQ15437 767 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 UAP1L1Q3KQV9 507 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 RFTN2Q52LD8 501 aaPredicted RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 FAM219BQ5XKK7 198 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 HIST3H2AQ7L7L0 130 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 CHMP1BQ7LBR1 199 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 FAM131BQ86XD5 332 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 SLITRK4Q8IW52 837 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 FTMTQ8N4E7 242 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 ATPAF2Q8N5M1 289 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 EID2Q8N6I1 236 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 MDGA1Q8NFP4 955 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 OR52P1PQ8NH57 321 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 WDR20Q8TBZ3 569 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 HIST1H2ACQ93077 130 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 NTMT1Q9BV86 223 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 B3GNT5Q9BYG0 378 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 DPY30Q9C005 99 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 POLR1EQ9GZS1 481 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 QRSL1Q9H0R6 528 aaKnown RBP4.57□□□□□ -1.68
PRKD3-210ENST00000494667 ABHD16BQ9H3Z7 469 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 OPA3Q9H6K4 179 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF302Q9NR11 478 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 PIGVQ9NUD9 493 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 RASL12Q9NYN1 266 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 TREM2Q9NZC2 230 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 MGAT4BQ9UQ53 548 aa4.57□□□□□ -1.68
PRKD3-210ENST00000494667 NAP1L6A6NFF2 107 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FAM72CH0Y354 149 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TNFRSF11BO00300 401 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 IMPA2O14732 288 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 LILRB5O75023 590 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RAB36O95755 333 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PEX11BO96011 259 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 OTCP00480 354 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 IGLV3-25P01717 112 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 VTNP04004 478 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RPA2P15927 270 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 XCR1P46094 333 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PREPP48147 710 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 WNT4P56705 351 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 EEF1A1P68104 462 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 DSC2Q02487 901 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 EEF1A2Q05639 463 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MBTD1Q05BQ5 628 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RING1Q06587 406 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SRSF4Q08170 494 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CACNB2Q08289 660 aaPredicted RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PPP1R8Q12972 351 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 IL10RAQ13651 578 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SNTB1Q13884 538 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PTGES3Q15185 160 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SMAD1Q15797 465 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 NTRK2Q16620 822 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TMEM255AQ5JRV8 349 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SPANXN4Q5MJ08 99 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FAM72AQ5TYM5 149 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 EEF1A1P5Q5VTE0 462 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FAM72DQ6L9T8 149 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SUSD1Q6UWL2 747 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 IKBIPQ70UQ0 350 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 FAM72BQ86X60 149 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 DNAJC5GQ8N7S2 189 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 ZNF454Q8N9F8 522 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 AGBL3Q8NEM8 1001 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 MOSPD2Q8NHP6 518 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 CLEC4CQ8WTT0 213 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 XAGE5Q8WWM1 108 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 EDEM1Q92611 657 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 RGMAQ96B86 450 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 PABPC5Q96DU9 382 aaKnown RBP4.56□□□□□ -1.68
PRKD3-210ENST00000494667 TCEAL4Q96EI5 215 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 SIPA1Q96FS4 1042 aa4.56□□□□□ -1.68
PRKD3-210ENST00000494667 GPR20Q99678 358 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms