RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LIX1Q8N485 282 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 ACBD4Q8NC06 268 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 JSRP1Q96MG2 331 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TREX2Q9BQ50 279 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-216ENST00000490796 ZNF559Q9BR84 538 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TTYH2Q9BSA4 534 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 VPS11Q9H270 941 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 RYDENQ9NUL5 291 aaKnown RBP18.19■□□□□ 0.5
SREBF1-216ENST00000490796 CNIH4Q9P003 139 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 TNFRSF10DQ9UBN6 386 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 B4GALT7Q9UBV7 327 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 EML6Q6ZMW3 1958 aa18.19■□□□□ 0.5
SREBF1-216ENST00000490796 OR6C76A6NM76 312 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 CAPN14A8MX76 684 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 HRKO00198 91 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 EEDO75530 441 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 CLDN9O95484 217 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 CELA3AP09093 270 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 MSX1P28360 303 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 ZFP36L2P47974 494 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 CKAP4Q07065 602 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 MYBPHQ13203 477 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 CUL3Q13618 768 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 PCBP2Q15366 365 aaKnown RBP eCLIP18.18■□□□□ 0.58e-26■■■■■ 40.8
SREBF1-216ENST00000490796 C1orf185Q5T7R7 199 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 C6orf163Q5TEZ5 329 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 TTC19Q6DKK2 380 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 C8orf74Q6P047 294 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 DGAT2L6Q6ZPD8 337 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 GOLGA7Q7Z5G4 137 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 FBXW8Q8N3Y1 598 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 PAQR8Q8TEZ7 354 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 DDX31Q9H8H2 851 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 ZFP64Q9NPA5 681 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 SEMA4BQ9NPR2 832 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 NPDC1Q9NQX5 325 aaPredicted RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 RNF11Q9Y3C5 154 aa18.18■□□□□ 0.5
SREBF1-216ENST00000490796 PHF3Q92576 2039 aaKnown RBP18.18■□□□□ 0.5
SREBF1-216ENST00000490796 C2CD3Q4AC94 2353 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 A0A0A6YYD5 115 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 ESYT3A0FGR9 886 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 LRRC14BA6NHZ5 514 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 HOXD4P09016 255 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-216ENST00000490796 GLI4P10075 376 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 GABRA1P14867 456 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 BSGP35613 385 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 NEK2P51955 445 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 CCNG1P51959 295 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 SLC7A5Q01650 507 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 GUCY2DQ02846 1103 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 SPRED3Q2MJR0 410 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 CES4AQ5XG92 561 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 METTL2BQ6P1Q9 378 aaKnown RBP18.17■□□□□ 0.5
SREBF1-216ENST00000490796 TMEM200AQ86VY9 491 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 DMRTC2Q8IXT2 367 aaPredicted RBP18.17■□□□□ 0.5
SREBF1-216ENST00000490796 MYRIPQ8NFW9 859 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 OR10G3Q8NGC4 313 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 DOHHQ9BU89 302 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 WWTR1Q9GZV5 400 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 ASB4Q9Y574 426 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 IKBKGQ9Y6K9 419 aa18.17■□□□□ 0.5
SREBF1-216ENST00000490796 C2orf92A0A1B0GVN3 265 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 A0A1W2PR48 441 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 FOXE1O00358 373 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TP53I11O14683 189 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TMPRSS11DO60235 418 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 KLK8O60259 260 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 SIX3O95343 332 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 NADKO95544 446 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 AIFM1O95831 613 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 FBXO45P0C2W1 286 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 SLC35E2P0CK97 266 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 IGFBP2P18065 325 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 PIK3R1P27986 724 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TFF3Q07654 80 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TMEM198Q66K66 360 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 OR52E8Q6IFG1 317 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 MRM1Q6IN84 353 aaKnown RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TAOK1Q7L7X3 1001 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 PTGR2Q8N8N7 351 aaPredicted RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 L3MBTL4Q8NA19 623 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 NOL11Q9H8H0 719 aaKnown RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 AHSPQ9NZD4 102 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 MTRF1LQ9UGC7 380 aaKnown RBP18.16■□□□□ 0.5
SREBF1-216ENST00000490796 KCNN3Q9UGI6 736 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 TMCO1Q9UM00 188 aa18.16■□□□□ 0.5
SREBF1-216ENST00000490796 WASHC1A8K0Z3 465 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 SMIM24O75264 130 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 ZWINTO95229 277 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 GBAP04062 536 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 INHBAP08476 426 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 RBP1P09455 135 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 GALNSP34059 522 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 SLC37A1P57057 533 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 EBPQ15125 230 aaKnown RBP18.15■□□□□ 0.5
SREBF1-216ENST00000490796 TBCELQ5QJ74 424 aa18.15■□□□□ 0.5
SREBF1-216ENST00000490796 C17orf53Q8N3J3 647 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms