RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FAM219B	Q5XKK7	198 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	ACSM2B	Q68CK6	577 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	SCIMP	Q6UWF3	145 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	CLEC18B	Q6UXF7	455 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	DGAT2L6	Q6ZPD8	337 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	GALNTL5	Q7Z4T8	443 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	CYP4Z2P	Q8N1L4	340 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	CLEC18C	Q8NCF0	446 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	NUBPL	Q8TB37	319 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	TCP10L	Q8TDR4	215 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	SREK1	Q8WXA9	508 aa	Known RBP	10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	UCN3	Q969E3	161 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	TM4SF18	Q96CE8	201 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	FAM111A	Q96PZ2	611 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	TRMO	Q9BU70	441 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	LIN28A	Q9H9Z2	209 aa	Known RBP	10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	HPF1	Q9NWY4	346 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	SENP1	Q9P0U3	644 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	MCM8	Q9UJA3	840 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	ERVK-11	Q9UQG0	969 aa		10.29	□□□□□ -0.76
GGA1-222	ENST00000489772	ASPDH	A6ND91	283 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	GOLGA6L10	A6NI86	522 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	KLRC4-KLRK1	H3BQV0	150 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	HRK	O00198	91 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	CPM	P14384	443 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	POR	P16435	677 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	ALDH9A1	P49189	494 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	HK2	P52789	917 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	ERVK-8	P63133	956 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	PMP22	Q01453	160 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	BTK	Q06187	659 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	HEPACAM	Q14CZ8	416 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	MPEG1	Q2M385	716 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	SLC48A1	Q6P1K1	146 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	RNF111	Q6ZNA4	994 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	SLC29A4	Q7RTT9	530 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	TRIM46	Q7Z4K8	759 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	GALNT12	Q8IXK2	581 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	APIP	Q96GX9	242 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	RASL10B	Q96S79	203 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	GATA5	Q9BWX5	397 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	SHCBP1L	Q9BZQ2	653 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	EML4	Q9HC35	981 aa	Known RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	TIMMDC1	Q9NPL8	285 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	SLC17A7	Q9P2U7	560 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	ERVK-19	Q9WJR5	959 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	KLF13	Q9Y2Y9	288 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	ZNF780B	Q9Y6R6	833 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	HECTD1	Q9ULT8	2610 aa		10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	USP9X	Q93008	2570 aa	Predicted RBP	10.28	□□□□□ -0.76
GGA1-222	ENST00000489772	OR6C76	A6NM76	312 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	ERAL1	O75616	437 aa	Known RBP	10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	OR6B1	O95007	311 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CHEK2	O96017	543 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	DRD2	P14416	443 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CSNK2A2	P19784	350 aa	Predicted RBP	10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	NT5E	P21589	574 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	MST1	P26927	711 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SERPINB3	P29508	390 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	ALDH3A1	P30838	453 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	TIA1	P31483	386 aa	Known RBP eCLIP	10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SOX3	P41225	446 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	GSTM5	P46439	218 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	TDGF1P3	P51864	188 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	RAE1	P78406	368 aa	Known RBP	10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	ALDH6A1	Q02252	535 aa	Known RBP	10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.27	□□□□□ -0.76	3e-10	■■■■■ 35.7
GGA1-222	ENST00000489772	PIGG	Q5H8A4	983 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	GALNT18	Q6P9A2	607 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	OPN5	Q6U736	354 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	IL20RB	Q6UXL0	311 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	GFRAL	Q6UXV0	394 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CROCCP2	Q86T23	111 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	ZNF227	Q86WZ6	799 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	C9orf40	Q8IXQ3	194 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SLC22A8	Q8TCC7	542 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	DOK4	Q8TEW6	326 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	KLHL29	Q96CT2	875 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	FRMD6	Q96NE9	622 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	EBPL	Q9BY08	206 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CENPH	Q9H3R5	247 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CXorf21	Q9HAI6	301 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SIRT5	Q9NXA8	310 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SEC14L3	Q9UDX4	400 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	UTS2R	Q9UKP6	389 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	CES1P1	Q9UKY3	287 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	DLGAP4	Q9Y2H0	992 aa		10.27	□□□□□ -0.76
GGA1-222	ENST00000489772	SETX	Q7Z333	2677 aa	Known RBP	10.27	□□□□□ -0.77
GGA1-222	ENST00000489772		A0A1W2PS29	197 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	AZIN1	O14977	448 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	CTIF	O43310	598 aa	Known RBP	10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	RGS14	O43566	566 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	TYROBP	O43914	113 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	NPHS1	O60500	1241 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	SEMA7A	O75326	666 aa		10.26	□□□□□ -0.77
GGA1-222	ENST00000489772	ERLIN1	O75477	346 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms