RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ZNF721Q8TF20 911 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 NEUROG1Q92886 237 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 HAUS8Q9BT25 410 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 RBM4Q9BWF3 364 aaKnown RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 HEMGNQ9BXL5 484 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 CACNG6Q9BXT2 260 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 MARCH4Q9P2E8 410 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 TMEFF2Q9UIK5 374 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-233ENST00000489352 RIMKLBQ9ULI2 386 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 SNX8Q9Y5X2 465 aa10.39□□□□□ -0.75
HDAC6-233ENST00000489352 B3GALT2O43825 422 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 CDH16O75309 829 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 CD8AP01732 235 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 AHRP35869 848 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 SLC1A1P43005 524 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 STARP49675 285 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 HNRNPFP52597 415 aaKnown RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 EIF3EP60228 445 aaKnown RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 STXBP1P61764 594 aaKnown RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 RUNX2Q13950 521 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 RPS6KA2Q15349 733 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 CTSL3PQ5NE16 218 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 TIGD3Q6B0B8 471 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 LCTLQ6UWM7 567 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 UBE2R2Q712K3 238 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 MPP5Q8N3R9 675 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 TMEM52Q8NDY8 209 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 C7orf57Q8NEG2 295 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 OR52K1Q8NGK4 314 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 SLC35G2Q8TBE7 412 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 RDH11Q8TC12 318 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 ASB11Q8WXH4 323 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 HTRA1Q92743 480 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 SENP5Q96HI0 755 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-233ENST00000489352 G6PC3Q9BUM1 346 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 KLHL31Q9H511 634 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 RYR3Q15413 4870 aa10.38□□□□□ -0.75
HDAC6-233ENST00000489352 hCG_1818297A0A087WSY0 165 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 IQANK1A0A1B0GTG1 560 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 CDC7O00311 574 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 CGAP01215 116 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 RPL22P35268 128 aaKnown RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 TMED10P49755 219 aaKnown RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 IRX1P78414 480 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 FUT7Q11130 342 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 NAE1Q13564 534 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 CSHL1Q14406 222 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 IQCCQ4KMZ1 466 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 NCMAPQ5T1S8 102 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 AGTRAPQ6RW13 159 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 ANGPTL8Q6UXH0 198 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 DNAJC14Q6Y2X3 702 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 STAC2Q6ZMT1 411 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 PEG10Q86TG7 708 aaKnown RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 C9orf40Q8IXQ3 194 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 RCOR2Q8IZ40 523 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 PRELID2Q8N945 189 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 TMEM41AQ96HV5 264 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 ZNF778Q96MU6 729 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 BTBD9Q96Q07 612 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 METTL7AQ9H8H3 244 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 ACTR8Q9H981 624 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 HYOU1Q9Y4L1 999 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 CLDN16Q9Y5I7 305 aa10.37□□□□□ -0.75
HDAC6-233ENST00000489352 EPN1Q9Y6I3 576 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-233ENST00000489352 A0A0G2JN53 185 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 PABPN1LA6NDY0 278 aaKnown RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 LDB3O75112 727 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ZNF189O75820 626 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ETHE1O95571 254 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ESR1P03372 595 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 SMIM10L1P0DMW3 83 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 NPPBP16860 134 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 PTNP21246 168 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 CASP3P42574 277 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 FBXW4P57775 412 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 UBE2HP62256 183 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 MYL5Q02045 173 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ACVR1Q04771 509 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 SETDB1Q15047 1291 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 FNDC7Q5VTL7 733 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 DTX2Q86UW9 622 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 PALM2Q8IXS6 379 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ABHD11Q8NFV4 315 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 KBTBD8Q8NFY9 601 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 OR4K1Q8NGD4 311 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 ACTL9Q8TC94 416 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 SPPL2AQ8TCT8 520 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 CTHRC1Q96CG8 243 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 DTNBP1Q96EV8 351 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 SMIM10Q96HG1 83 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 BIRC8Q96P09 236 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 DGAT2Q96PD7 388 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms