RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 TMEM52Q8NDY8 209 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 OR51Q1Q8NH59 317 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 SUN3Q8TAQ9 357 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 PYDC1Q8WXC3 89 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 FAM162AQ96A26 154 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 SLC35G5Q96KT7 338 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 OR1F2PQ96R84 312 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 STRADBQ9C0K7 418 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 C3orf14Q9HBI5 128 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 ZNF304Q9HCX3 659 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 PRTFDC1Q9NRG1 225 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 DDX18Q9NVP1 670 aaKnown RBP9.42□□□□□ -0.9
USP11-211ENST00000489111 SIDT1Q9NXL6 827 aaKnown RBP9.42□□□□□ -0.9
USP11-211ENST00000489111 TRPC4Q9UBN4 977 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 RAPGEFL1Q9UHV5 662 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 ANGPTL2Q9UKU9 493 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 FAF1Q9UNN5 650 aaPredicted RBP9.42□□□□□ -0.9
USP11-211ENST00000489111 USP22Q9UPT9 525 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 ERVK-11Q9UQG0 969 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 PCM1Q15154 2024 aa9.42□□□□□ -0.9
USP11-211ENST00000489111 TDRD6O60522 2096 aaKnown RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 TP53BP1Q12888 1972 aaPredicted RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 TMEM131Q92545 1883 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 A0A1W2PS29 197 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 DHRS12A0PJE2 317 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 TMEM247A6NEH6 219 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 EMC8O43402 210 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 HYAL3O43820 417 aaPredicted RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 CBFA2T3O75081 653 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 CDC123O75794 336 aaPredicted RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 SLITRK5O94991 958 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 ATP1B1P05026 303 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 GPIP06744 558 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 ETFAP13804 333 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 NT5EP21589 574 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 PSMA4P25789 261 aaKnown RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 PTGER1P34995 402 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 MAGEA8P43361 318 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 GCGRP47871 477 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 OR1D4P47884 311 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 GZMMP51124 257 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 PRKAG1P54619 331 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 HSD17B7P56937 341 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 DSTNP60981 165 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 DUSP2Q05923 314 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 ZFP36L1Q07352 338 aaKnown RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 RBBP4Q09028 425 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 IL11RAQ14626 422 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 C16orf72Q14CZ0 275 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 LTB4RQ15722 352 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 FXNQ16595 210 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 VMACQ2NL98 169 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 COX20Q5RI15 118 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 PRAMEF17Q5VTA0 474 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 GLYATQ6IB77 296 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 RHBDD2Q6NTF9 364 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 ZZZ3Q8IYH5 903 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 GOLM1Q8NBJ4 401 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 KAT2AQ92830 837 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 CLIP3Q96DZ5 547 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 MS4A4EQ96PG1 132 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 PELOQ9BRX2 385 aaKnown RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 EFHD1Q9BUP0 239 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 TMEM121BQ9BXQ6 578 aaPredicted RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 TRIM4Q9C037 500 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 EPS8L2Q9H6S3 715 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 S100A14Q9HCY8 104 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 PARD6AQ9NPB6 346 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 THUMPD1Q9NXG2 353 aaKnown RBP9.41□□□□□ -0.9
USP11-211ENST00000489111 PTGFRNQ9P2B2 879 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 ANGPT4Q9Y264 503 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 HCN4Q9Y3Q4 1203 aa9.41□□□□□ -0.9
USP11-211ENST00000489111 MYOCOSA0A1B0GUC4 107 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 TCRBV3S1A0A5B6 114 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 POLR1CO15160 346 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 CTNSO60931 367 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 CPNE3O75131 537 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 KCNK5O95279 499 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 BAG2O95816 211 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 C1QCP02747 245 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 SLC35E2P0CK97 266 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 IL10P22301 178 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 CCKBRP32239 447 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 PDX1P52945 283 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 MVDP53602 400 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 MAPK10P53779 464 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 CASP9P55211 416 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 SESN3P58005 492 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 RPS26P62854 115 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 TXNL4AP83876 142 aaKnown RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 RHDQ02161 417 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 SERTAD2Q14140 314 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 ZNF630Q2M218 657 aaPredicted RBP9.4□□□□□ -0.9
USP11-211ENST00000489111 MINDY4Q4G0A6 757 aa9.4□□□□□ -0.9
USP11-211ENST00000489111 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms