RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 AMER3Q8N944 861 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 AFAP1L1Q8TED9 768 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 UBLCP1Q8WVY7 318 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 TOMM40LQ969M1 308 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 NXPE2Q96DL1 559 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 CNRIP1Q96F85 164 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 RBM41Q96IZ5 413 aaKnown RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 CITED2Q99967 270 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ALKBH7Q9BT30 221 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 DCTN5Q9BTE1 182 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 VIPAS39Q9H9C1 493 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 C3orf14Q9HBI5 128 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 VPS18Q9P253 973 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 DBF4Q9UBU7 674 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 NCKAP1Q9Y2A7 1128 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 NSG2Q9Y328 171 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 ACACAQ13085 2346 aa3.56□□□□□ -1.84
ITGB1-214ENST00000488427 SETD2Q9BYW2 2564 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-214ENST00000488427 AKAP13Q12802 2813 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 A0A0B4J203 849 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 ILVBLA1L0T0 632 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 MTMR11A4FU01 709 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 NPIPB9F8W1W9 429 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 CCL24O00175 119 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 OGTO15294 1046 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 PRAF2O60831 178 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 PDGFBP01127 241 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-214ENST00000488427 RLN1P04808 185 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 SP9P0CG40 484 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 HOXC13P31276 330 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 IER3P46695 156 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 RPP38P78345 283 aaKnown RBP3.55□□□□□ -1.84
ITGB1-214ENST00000488427 SRPXP78539 464 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 ZNF542PQ5EBM4 170 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 SLC10A5Q5PT55 438 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 OR4C11Q6IEV9 310 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 DHRS11Q6UWP2 260 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 GPRIN3Q6ZVF9 776 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 TMUB2Q71RG4 321 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 TRMT11Q7Z4G4 463 aaKnown RBP3.55□□□□□ -1.84
ITGB1-214ENST00000488427 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 PIGWQ7Z7B1 504 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 VSIG1Q86XK7 387 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
ITGB1-214ENST00000488427 CDC20BQ86Y33 519 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 TEX26Q8N6G2 289 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 TMEM99Q8N816 258 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 TMEM105Q8N8V8 129 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 DNASE1L2Q92874 299 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 PAPOLGQ9BWT3 736 aaKnown RBP3.55□□□□□ -1.84
ITGB1-214ENST00000488427 STRADBQ9C0K7 418 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 DNAI2Q9GZS0 605 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 ST6GALNAC4Q9H4F1 302 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 HEXA-AS1Q9H8Q6 139 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 CTSZQ9UBR2 303 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 ITGA11Q9UKX5 1188 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 SATB2Q9UPW6 733 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 SPG11Q96JI7 2443 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 LOC285556D6RIA3 1793 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 PCNX1Q96RV3 2341 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 FREM2Q5SZK8 3169 aa3.55□□□□□ -1.84
ITGB1-214ENST00000488427 NAV3Q8IVL0 2385 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 DOCK1Q14185 1865 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 TRAV34A0A0B4J273 112 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 C5orf52A6NGY3 159 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 ERVV-1B6SEH8 477 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 TNFSF12O43508 249 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 KIF5CO60282 957 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 NXPH4O95158 308 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 FAM58BPP0C7Q3 252 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 PCP11498 1178 aaKnown RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 TCF4P15884 667 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 FCGR2BP31994 310 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 FCGR2CP31995 323 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 RIDAP52758 137 aaKnown RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 CRYBA2P53672 197 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 FKBP3Q00688 224 aaKnown RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 TAZQ16635 292 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 PARP10Q53GL7 1025 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 ANKRD46Q86W74 232 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 KLHL7Q8IXQ5 586 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 SLC39A11Q8N1S5 342 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 Q8N377 158 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 POM121L12Q8N7R1 296 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 C17orf47Q8NEP4 570 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 CHPT1Q8WUD6 406 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 CKAP2Q8WWK9 683 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 RIT1Q92963 219 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 BSCL2Q96G97 398 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 NEDD4LQ96PU5 975 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 SOSTQ9BQB4 213 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 PI4K2AQ9BTU6 479 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 FAM129AQ9BZQ8 928 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 PNNQ9H307 717 aaKnown RBP3.54□□□□□ -1.84
ITGB1-214ENST00000488427 JPT2Q9H910 190 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 LMAN1LQ9HAT1 526 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 KCNK13Q9HB14 408 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 GMEB2Q9UKD1 530 aa3.54□□□□□ -1.84
ITGB1-214ENST00000488427 POMT2Q9UKY4 750 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms