RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ZNF724A8MTY0 619 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ARHGEF33A8MVX0 844 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MEI4A8MW99 385 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ARPC1BO15143 372 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 PRPSAP2O60256 369 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SYNGR4O95473 234 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MT-ATP6P00846 226 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MBL2P11226 248 aaPredicted RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ETS1P14921 441 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MAPK3P27361 379 aaPredicted RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 CAPGP40121 348 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ID1P41134 155 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MTIF2P46199 727 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC1A6P48664 564 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ATXN3P54252 364 aaPredicted RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 LMO4P61968 165 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 RPS27AP62979 156 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 IL1RL1Q01638 556 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ELAVL2Q12926 359 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC17A1Q14916 467 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 CARTPTQ16568 116 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 CMPK2Q5EBM0 449 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 OR6B2Q6IFH4 312 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 DOK6Q6PKX4 331 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 BNIPLQ7Z465 357 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC22A16Q86VW1 577 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ELMOD2Q8IZ81 293 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ICA1LQ8NDH6 482 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 RDH11Q8TC12 318 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 U2AF1L4Q8WU68 220 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 NABP1Q96AH0 204 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 COG3Q96JB2 828 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF599Q96NL3 588 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 ANKRD27Q96NW4 1050 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 RCHY1Q96PM5 261 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 TAAR6Q96RI8 345 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 IWS1Q96ST2 819 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 COQ7Q99807 217 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 LRRC61Q9BV99 259 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 FTHL17Q9BXU8 183 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SIRPDQ9H106 197 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MOB1AQ9H8S9 216 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SLC25A19Q9HC21 320 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 HPS4Q9NQG7 708 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 DEPPQ9NTK1 212 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 THYN1Q9P016 225 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 SPASTQ9UBP0 616 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MUTYHQ9UIF7 546 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 HOOK1Q9UJC3 728 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 PIN4Q9Y237 131 aaKnown RBP2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 KIF7Q2M1P5 1343 aa2.9□□□□□ -1.95
SNRNP27-204ENST00000487029 MYH15Q9Y2K3 1946 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 NPC1L1Q9UHC9 1359 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 IGLV4-3A0A075B6K6 122 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 IGHV3OR16-10A0A075B7F0 116 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 TRBV5-4A0A0C4DH59 114 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 A0A0U1RRA0 63 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 BCLAF3A2AJT9 711 aaKnown RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 TMEM89A2RUT3 159 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 A8MXK9 166 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 EPM2AB3EWF7 344 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 K7EQG2 157 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 SSX5O60225 188 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 TSPAN2O60636 221 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 POP4O95707 220 aaKnown RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 FCER2P06734 321 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF10P21506 573 aaPredicted RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 OXTRP30559 389 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 RABIFP47224 123 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 NUMBP49757 651 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 TKTL1P51854 596 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 NDUFV3P56181 108 aaKnown RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 NLRP11P59045 1033 aaKnown RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 KLF5Q13887 457 aaPredicted RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 MUC21Q5SSG8 566 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 LIPJQ5W064 366 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 OLFM4Q6UX06 510 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ASRGL1Q7L266 308 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 RNF130Q86XS8 419 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 BANPQ8N9N5 519 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 OR1K1Q8NGR3 316 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 MIPOL1Q8TD10 442 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 SSC4DQ8WTU2 575 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 NPRL2Q8WTW4 380 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 CHPT1Q8WUD6 406 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 P3H4Q92791 437 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 PNPLA2Q96AD5 504 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ZNF689Q96CS4 500 aaPredicted RBP2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 FAM111AQ96PZ2 611 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ATF6BQ99941 703 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 OCR1Q9BZK8 76 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ATG10Q9H0Y0 220 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 HSD3B7Q9H2F3 369 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 SP140LQ9H930 580 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 ENTPD4Q9Y227 616 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 PRSS21Q9Y6M0 314 aa2.89□□□□□ -1.95
SNRNP27-204ENST00000487029 IGKV6D-41A0A0C4DH26 115 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 TRGV8A0A0C4DH27 118 aa2.88□□□□□ -1.95
SNRNP27-204ENST00000487029 PDHXO00330 501 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms