RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 ZNF32P17041 273 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 TKTL1P51854 596 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 ARHGDIAP52565 204 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 MFAP2P55001 183 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 MEF2DQ14814 521 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 P2RY14Q15391 338 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 SEL1L2Q5TEA6 688 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 C17orf64Q86WR6 236 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 ZNF677Q86XU0 584 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 KLHL7Q8IXQ5 586 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 SIX6OS1Q8N1H7 587 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 GPR137CQ8N3F9 429 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 ICA1LQ8NDH6 482 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 GANCQ8TET4 914 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 FRAT1Q92837 279 aaPredicted RBP2.12□□□□□ -2.07
VPS50-216ENST00000484954 MR1Q95460 341 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 FAF2Q96CS3 445 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 ERO1AQ96HE7 468 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 PARK7Q99497 189 aaKnown RBP2.12□□□□□ -2.07
VPS50-216ENST00000484954 LRRC2Q9BYS8 371 aa2.12□□□□□ -2.07
VPS50-216ENST00000484954 RNF41Q9H4P4 317 aaPredicted RBP2.12□□□□□ -2.07
VPS50-216ENST00000484954 ISG20L2Q9H9L3 353 aaKnown RBP2.12□□□□□ -2.07
VPS50-216ENST00000484954 ELL3Q9HB65 397 aaPredicted RBP2.12□□□□□ -2.07
VPS50-216ENST00000484954 TMEM129A0AVI4 362 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 K7ERI5 159 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 GPAA1O43292 621 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 DUSP14O95147 198 aaKnown RBP2.11□□□□□ -2.07
VPS50-216ENST00000484954 PROS1P07225 676 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 HOXC4P09017 264 aaPredicted RBP2.11□□□□□ -2.07
VPS50-216ENST00000484954 CALML3P27482 149 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 SOAT1P35610 550 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 OR1C1Q15619 314 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ACKR1Q16570 336 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ADGRD2Q7Z7M1 963 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ASPGQ86U10 573 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 METTL23Q86XA0 190 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 KLHDC8AQ8IYD2 350 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ZNF444Q8N0Y2 327 aaPredicted RBP2.11□□□□□ -2.07
VPS50-216ENST00000484954 ARL14Q8N4G2 192 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 CASD1Q96PB1 797 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 HES7Q9BYE0 225 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 Q9HAA7 133 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 IMPAD1Q9NX62 359 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 MIS18AQ9NYP9 233 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ADAM22Q9P0K1 906 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 TMEM9Q9P0T7 183 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 RPS6KB2Q9UBS0 482 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 SEC14L4Q9UDX3 406 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 NTNG1Q9Y2I2 539 aa2.11□□□□□ -2.07
VPS50-216ENST00000484954 ARID1AO14497 2285 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 FAM231BA6NCW3 169 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 TRABD2BA6NFA1 517 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 SLC15A5A6NIM6 579 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 A8MX80 341 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 IFIT3O14879 490 aaKnown RBP2.1□□□□□ -2.07
VPS50-216ENST00000484954 ATP9AO75110 1047 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 GJB5O95377 273 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 PRAMEF12O95522 483 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 EPOP01588 193 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 NUDT17P0C025 328 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 CPN1P15169 458 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 B4GALT1P15291 398 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 IDSP22304 550 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 UCP1P25874 307 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 PRKAR2BP31323 418 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 TRIM23P36406 574 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 HEPACAMQ14CZ8 416 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 MICAQ29983 383 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 IGFL3Q6UXB1 125 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 Q8N9G6 341 aaPredicted RBP2.1□□□□□ -2.07
VPS50-216ENST00000484954 UBLCP1Q8WVY7 318 aaPredicted RBP2.1□□□□□ -2.07
VPS50-216ENST00000484954 ZNF799Q96GE5 643 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 CAPNS2Q96L46 248 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 TECTBQ96PL2 329 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 S1PR3Q99500 378 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 SDHCQ99643 169 aaPredicted RBP2.1□□□□□ -2.07
VPS50-216ENST00000484954 TIGARQ9NQ88 270 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 GDF3Q9NR23 364 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 KLRF1Q9NZS2 232 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 SEPT10Q9P0V9 454 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 DNAJB9Q9UBS3 223 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 SWAP70Q9UH65 585 aa2.1□□□□□ -2.07
VPS50-216ENST00000484954 LRRK1Q38SD2 2015 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 ZNF861PO60384 105 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 STBD1O95210 358 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 CPNE6O95741 557 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 HSPA4LO95757 839 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 SLC16A8O95907 504 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 GOT2P00505 430 aaKnown RBP2.09□□□□□ -2.07
VPS50-216ENST00000484954 OAS1P00973 400 aaKnown RBP2.09□□□□□ -2.07
VPS50-216ENST00000484954 CASTP20810 708 aaKnown RBP2.09□□□□□ -2.07
VPS50-216ENST00000484954 TNFSF10P50591 281 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 ZNF133P52736 654 aaPredicted RBP2.09□□□□□ -2.07
VPS50-216ENST00000484954 GABPAQ06546 454 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 ARHGAP1Q07960 439 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 ASAH1Q13510 395 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 PTK6Q13882 451 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 QRICH1Q2TAL8 776 aa2.09□□□□□ -2.07
VPS50-216ENST00000484954 C2orf66Q6UXQ4 117 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms