RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ANKRD28O15084 1053 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SNX3O60493 162 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SLC22A3O75751 556 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 ABCB1P08183 1280 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 CPMP14384 443 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 PORP16435 677 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 CSNK2A2P19784 350 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 DGKQP52824 942 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 TMPRSS3P57727 454 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SQLEQ14534 574 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 PCOLCEQ15113 449 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 FAM174BQ3ZCQ3 159 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 PDCD4Q53EL6 469 aaKnown RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 AGKQ53H12 422 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 C6orf163Q5TEZ5 329 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 GK5Q6ZS86 529 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF551Q7Z340 670 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 SZRD1Q7Z422 152 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 ANKRD46Q86W74 232 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 PARP9Q8IXQ6 854 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 LRRC25Q8N386 305 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 KAT2AQ92830 837 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 RBM18Q96H35 190 aaKnown RBP12.37□□□□□ -0.43
HDAC1-208ENST00000482310 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 OR8D2Q9GZM6 311 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 ANKRA2Q9H9E1 313 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 ADAP2Q9NPF8 381 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 CCDC167Q9P0B6 97 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 MGAQ8IWI9 3026 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 PTPRQQ9UMZ3 2332 aa12.37□□□□□ -0.43
HDAC1-208ENST00000482310 EML6Q6ZMW3 1958 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 EXPH5Q8NEV8 1989 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 A6NL46 340 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CFLARO15519 480 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CT62P0C5K7 136 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CD1EP15812 388 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 GPX3P22352 226 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 S100A3P33764 101 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 GPC1P35052 558 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 RPL3P39023 403 aaKnown RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 STT3AP46977 705 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CLNS1AP54105 237 aaKnown RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 MRPS35P82673 323 aaKnown RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 RAPSNQ13702 412 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 PDE7AQ13946 482 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF267Q14586 743 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 MPEG1Q2M385 716 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 BTBD16Q32M84 506 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 SOWAHCQ53LP3 525 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 TMEM107Q6UX40 140 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 RIMKLAQ8IXN7 391 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ST13P4Q8IZP2 240 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 FAM9CQ8IZT9 166 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF321PQ8N8H1 164 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 RIT1Q92963 219 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 PRPF18Q99633 342 aaKnown RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 LPAR4Q99677 370 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 WDR77Q9BQA1 342 aaPredicted RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 DUSP26Q9BV47 211 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ZNF700Q9H0M5 742 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 GLIPR2Q9H4G4 154 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ARMCX1Q9P291 453 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ATP6V1HQ9UI12 483 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 ERVK-19Q9WJR5 959 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 POLHQ9Y253 713 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 WBP11Q9Y2W2 641 aaKnown RBP12.36□□□□□ -0.43
HDAC1-208ENST00000482310 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
HDAC1-208ENST00000482310 A0A087WV48 116 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SAGE2PA6NJ88 616 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 NME6O75414 186 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 DNAJB5O75953 348 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 CPSF4O95639 269 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 C6orf47O95873 294 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SLC35E2P0CK97 266 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SOAT1P35610 550 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 KIR3DL1P43629 444 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 ST13P50502 369 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 POLR2JP52435 117 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 MANFP55145 182 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 VAC14Q08AM6 782 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 EXOSC7Q15024 291 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 ELAVL1Q15717 326 aaKnown RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 TIGD2Q4W5G0 525 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 DNAJC14Q6Y2X3 702 aaPredicted RBP12.35□□□□□ -0.43
HDAC1-208ENST00000482310 MED25Q71SY5 747 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 NDUFAF7Q7L592 441 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 GALNT12Q8IXK2 581 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 CLECL1Q8IZS7 167 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 KIF2BQ8N4N8 673 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 SUN3Q8TAQ9 357 aa12.35□□□□□ -0.43
HDAC1-208ENST00000482310 PTPMT1Q8WUK0 201 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms