RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ATP6AP1LQ52LC2 224 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 ACER2Q5QJU3 275 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 C6orf136Q5SQH8 315 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 ANKRD26P1Q6NSI1 321 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 C16orf47Q6ZP98 133 aaPredicted RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 RBMXL3Q8N7X1 1067 aaKnown RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 TEX19Q8NA77 164 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 MORN4Q8NDC4 146 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 CNRIP1Q96F85 164 aaPredicted RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 VMP1Q96GC9 406 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 FCRL1Q96LA6 429 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 AKTIPQ9H8T0 292 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 MYNNQ9NPC7 610 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 PFDN4Q9NQP4 134 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 INTS9Q9NV88 658 aaKnown RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 PSME2Q9UL46 239 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 PPIEQ9UNP9 301 aaKnown RBP18.96■□□□□ 0.63
CTSA-206ENST00000480961 PCDHGB7Q9Y5F8 929 aa18.96■□□□□ 0.63
CTSA-206ENST00000480961 PORP16435 677 aaPredicted RBP18.95■□□□□ 0.62
CTSA-206ENST00000480961 NT5EP21589 574 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 CLCN2P51788 898 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 ERVK-8P63133 956 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 BIKQ13323 160 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 ABHD17BQ5VST6 288 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 H3F3CQ6NXT2 135 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 TICAM1Q8IUC6 712 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 FNDC5Q8NAU1 212 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 CATSPER1Q8NEC5 780 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 ADCY4Q8NFM4 1077 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 OR1N1Q8NGS0 311 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 LRRC8CQ8TDW0 803 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 METTL2AQ96IZ6 378 aaKnown RBP18.95■□□□□ 0.62
CTSA-206ENST00000480961 LMF1Q96S06 567 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 CCT7Q99832 543 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 EPS8L2Q9H6S3 715 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 ERVK-19Q9WJR5 959 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 ZNF780BQ9Y6R6 833 aa18.95■□□□□ 0.62
CTSA-206ENST00000480961 SYNDIG1LA6NDD5 238 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 DPM1O60762 260 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 WDPCPO95876 746 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 CT62P0C5K7 136 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 CSNK2A2P19784 350 aaPredicted RBP18.94■□□□□ 0.62
CTSA-206ENST00000480961 DDCP20711 480 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 LTB4RQ15722 352 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 IL23RQ5VWK5 629 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 FAM111BQ6SJ93 734 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 IGFL2Q6UWQ7 119 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 RPS19BP1Q86WX3 136 aaKnown RBP18.94■□□□□ 0.62
CTSA-206ENST00000480961 WDR75Q8IWA0 830 aaKnown RBP18.94■□□□□ 0.62
CTSA-206ENST00000480961 HOMEZQ8IX15 550 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 CCDC116Q8IYX3 515 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 BEST3Q8N1M1 668 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 LIX1Q8N485 282 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 ZADH2Q8N4Q0 377 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 SLC5A8Q8N695 610 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 ZNF721Q8TF20 911 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 NUDT8Q8WV74 236 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 ZNF354BQ96LW1 612 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 ZNF681Q96N22 645 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 PELOQ9BRX2 385 aaKnown RBP18.94■□□□□ 0.62
CTSA-206ENST00000480961 CXorf21Q9HAI6 301 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 SLCO1B3Q9NPD5 702 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 MIEF1Q9NQG6 463 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 ANKRD10Q9NXR5 420 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 TEKT2Q9UIF3 430 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 TMED5Q9Y3A6 229 aa18.94■□□□□ 0.62
CTSA-206ENST00000480961 KLF11O14901 512 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 DYRK3O43781 588 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 ZFAND5O76080 213 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 SSTR4P31391 388 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 ARG2P78540 354 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 KLRB1Q12918 225 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 IGFL3Q6UXB1 125 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 HSDL2Q6YN16 418 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 C7orf57Q8NEG2 295 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 TM9SF4Q92544 642 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 FBXL20Q96IG2 436 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 BRINP2Q9C0B6 783 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 SLC35C2Q9NQQ7 365 aa18.93■□□□□ 0.62
CTSA-206ENST00000480961 TNRC6AQ8NDV7 1962 aaKnown RBP18.92■□□□□ 0.62
CTSA-206ENST00000480961 TMEM200CA6NKL6 621 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 IGKV3-11P04433 115 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 GSTM5P46439 218 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 MGAT2Q10469 447 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 MEP1AQ16819 746 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 PLEKHN1Q494U1 663 aaPredicted RBP18.92■□□□□ 0.62
CTSA-206ENST00000480961 IKBIPQ70UQ0 350 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 GALNT12Q8IXK2 581 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 LRRC25Q8N386 305 aaPredicted RBP18.92■□□□□ 0.62
CTSA-206ENST00000480961 BBS4Q96RK4 519 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 WDR55Q9H6Y2 383 aaPredicted RBP18.92■□□□□ 0.62
CTSA-206ENST00000480961 COPS7AQ9UBW8 275 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 ENTPD4Q9Y227 616 aa18.92■□□□□ 0.62
CTSA-206ENST00000480961 WBP11Q9Y2W2 641 aaKnown RBP18.92■□□□□ 0.62
CTSA-206ENST00000480961 GOLGA8QA0A0J9YX86 632 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 GOLGA8OA6NCC3 632 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 GOLGA8NF8WBI6 632 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 WWP2O00308 870 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 SDHDO14521 159 aa18.91■□□□□ 0.62
CTSA-206ENST00000480961 HDAC3O15379 428 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms