RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FAM9CQ8IZT9 166 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 C9orf43Q8TAL5 461 aaPredicted RBP18.41■□□□□ 0.54
LIME1-205ENST00000480139 SLC2A12Q8TD20 617 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 ACTRT2Q8TDY3 377 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 FBXL20Q96IG2 436 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 AGAP4Q96P64 663 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 C1orf50Q9BV19 199 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 CCDC134Q9H6E4 229 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 REEP4Q9H6H4 257 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 GIMAP4Q9NUV9 329 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 BAIAP2L1Q9UHR4 511 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 ENTPD4Q9Y227 616 aa18.41■□□□□ 0.54
LIME1-205ENST00000480139 A0A1W2PS29 197 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 EDF1O60869 148 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 DDX5P17844 614 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 EPHA3P29320 983 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 CLCN2P51788 898 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 PGDP52209 483 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 C21orf58P58505 322 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 DGAT2L6Q6ZPD8 337 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 FAM47EQ6ZV65 393 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 R3HCC1LQ7Z5L2 792 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 LGI4Q8N135 537 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 ARMC10Q8N2F6 343 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 LRRC25Q8N386 305 aaPredicted RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 OR1N1Q8NGS0 311 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 BRIX1Q8TDN6 353 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 STON2Q8WXE9 905 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 RIT1Q92963 219 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 NCLNQ969V3 563 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 EXOSC8Q96B26 276 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 PPWD1Q96BP3 646 aaKnown RBP18.4■□□□□ 0.54
LIME1-205ENST00000480139 CXorf21Q9HAI6 301 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 KCNK13Q9HB14 408 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 MAPRE3Q9UPY8 281 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 CROCCQ5TZA2 2017 aa18.4■□□□□ 0.54
LIME1-205ENST00000480139 ZFYVE26Q68DK2 2539 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 IGKV3-11P04433 115 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 HPCAL1P37235 193 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 FEN1P39748 380 aaKnown RBP18.39■□□□□ 0.53
LIME1-205ENST00000480139 PTGR1Q14914 329 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 EPGNQ6UW88 154 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 IGFL2Q6UWQ7 119 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 IGFL3Q6UXB1 125 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 SPATA19Q7Z5L4 167 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 GALNT12Q8IXK2 581 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 OR8K3Q8NH51 312 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 ZNF721Q8TF20 911 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 SENP5Q96HI0 755 aaPredicted RBP18.39■□□□□ 0.53
LIME1-205ENST00000480139 WDR55Q9H6Y2 383 aaPredicted RBP18.39■□□□□ 0.53
LIME1-205ENST00000480139 COPS7AQ9UBW8 275 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 ATP6V1HQ9UI12 483 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 TEKT2Q9UIF3 430 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 ZNF223Q9UK11 482 aaPredicted RBP18.39■□□□□ 0.53
LIME1-205ENST00000480139 ZNF451Q9Y4E5 1061 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 PIEZO2Q9H5I5 2752 aa18.39■□□□□ 0.53
LIME1-205ENST00000480139 MYO1GB0I1T2 1018 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 TCP11X1B4DZS4 312 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SCAMP2O15127 329 aaKnown RBP18.38■□□□□ 0.53
LIME1-205ENST00000480139 G6PDP11413 515 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 PRPS1L1P21108 318 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 MPIP34949 423 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 MDH1P40925 334 aaKnown RBP18.38■□□□□ 0.53
LIME1-205ENST00000480139 DIO3P55073 304 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 CLDN8P56748 225 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 MAP4K2Q12851 820 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 RAPSNQ13702 412 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 PRICKLE4Q2TBC4 344 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 ZNF750Q32MQ0 723 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SLC9B1Q4ZJI4 515 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 LACTB2Q53H82 288 aaPredicted RBP18.38■□□□□ 0.53
LIME1-205ENST00000480139 C6orf163Q5TEZ5 329 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 ISLR2Q6UXK2 745 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 RIMKLAQ8IXN7 391 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 KIF2BQ8N4N8 673 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SLC5A8Q8N695 610 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 AMER2Q8N7J2 671 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 CLHC1Q8NHS4 586 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SUN3Q8TAQ9 357 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 ZNF675Q8TD23 568 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 PPCDCQ96CD2 204 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 ERP27Q96DN0 273 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 LMF1Q96S06 567 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SIKE1Q9BRV8 207 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 OR8D2Q9GZM6 311 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SLC25A18Q9H1K4 315 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.38■□□□□ 0.53
LIME1-205ENST00000480139 TP53TG5Q9Y2B4 290 aa18.38■□□□□ 0.53
LIME1-205ENST00000480139 GOLGA8QA0A0J9YX86 632 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 TRBV11-1A0A0K0K1C0 115 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 GOLGA8OA6NCC3 632 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 GOLGA8NF8WBI6 632 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 CDK2AP1O14519 115 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 AKAP10O43572 662 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 SLITRK5O94991 958 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 LRATO95237 230 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 NT5EP21589 574 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 NTSP30990 170 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 GUCY1A3Q02108 690 aa18.37■□□□□ 0.53
LIME1-205ENST00000480139 DUSP2Q05923 314 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms