RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 NUP214P35658 2090 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 APC2O95996 2303 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 A0A1W2PS29 197 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 COX4I1P13073 169 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 CD1EP15812 388 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 F8A1P23610 371 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 DGKQP52824 942 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 ID2Q02363 134 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 STX5Q13190 355 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 CLN3Q13286 438 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 SSPNQ14714 243 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 TLR1Q15399 786 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 NSDHLQ15738 373 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 CRTC2Q53ET0 693 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 C6orf89Q6UWU4 347 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 SHISA6Q6ZSJ9 500 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 ANKRD37Q7Z713 158 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 SNX32Q86XE0 403 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR4N5Q8IXE1 308 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 PRSS58Q8IYP2 241 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 ZNF248Q8NDW4 579 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 DNAJB8Q8NHS0 232 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 ADAMTS17Q8TE56 1095 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 METTL21AQ8WXB1 218 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR5P2Q8WZ92 322 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 VPS33AQ96AX1 596 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 CTHRC1Q96CG8 243 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 DGAT2Q96PD7 388 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 GLIPR2Q9H4G4 154 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 GPN2Q9H9Y4 310 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 PPIEQ9UNP9 301 aaKnown RBP11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 NDUFAF1Q9Y375 327 aa11.74□□□□□ -0.53
TRAPPC12-218ENST00000479897 A0A087WV62 115 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR2W5A6NFC9 320 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 PLOD2O00469 737 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ANGPT2O15123 496 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TLX3O43711 291 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 CAPNS1P04632 268 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 LIFP15018 202 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 HOXB9P17482 250 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 FEN1P39748 380 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TRPC1P48995 793 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 NCBP2P52298 156 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 FOXL2P58012 376 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 RPS18P62269 152 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ACACAQ13085 2346 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TGIF1Q15583 401 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 MAPKAPK3Q16644 382 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ZNF750Q32MQ0 723 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 VPS26BQ4G0F5 336 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ZNF628Q5EBL2 1059 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 FAM180BQ6P0A1 224 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 LANCL3Q6ZV70 420 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TMEM151BQ8IW70 566 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 GALNT12Q8IXK2 581 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR14A16Q8NHC5 309 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 KCNE4Q8WWG9 221 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 GTF2H4Q92759 462 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 RBM18Q96H35 190 aaKnown RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 ITCHQ96J02 903 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 IP6K3Q96PC2 410 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 DPH1Q9BZG8 443 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 CXorf21Q9HAI6 301 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 SIRT3Q9NTG7 399 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TAS2R9Q9NYW1 312 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 MAT2BQ9NZL9 334 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 NTMQ9P121 344 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 TAGLN3Q9UI15 199 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 HS3ST3B1Q9Y662 390 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 GMEB1Q9Y692 573 aa11.73□□□□□ -0.53
TRAPPC12-218ENST00000479897 A0A096LPI6 279 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 TRBV5-3A0A0A0MS03 114 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 SAGE2PA6NJ88 616 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 CCT8L1PA6NM43 557 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 FBP2O00757 339 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 SOCS6O14544 535 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR10H2O60403 315 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 PLOD3O60568 738 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 ERN1O75460 977 aaKnown RBP11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 CREG1O75629 220 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 C6orf47O95873 294 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 NPPAP01160 153 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 PTPN6P29350 595 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 SOX18P35713 384 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 MANFP55145 182 aaKnown RBP11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 OR4D2P58180 307 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 HBA1P69905 142 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 MGAT2Q10469 447 aa11.72□□□□□ -0.53
TRAPPC12-218ENST00000479897 MAP4K2Q12851 820 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms