RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 SLAMF1Q13291 335 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 TOMM20Q15388 145 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 C18orf63Q68DL7 685 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 CHSY3Q70JA7 882 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 MAATS1Q7Z4T9 603 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 KLHL7Q8IXQ5 586 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 DND1Q8IYX4 353 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 RNF175Q8N4F7 328 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF473Q8WTR7 871 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 DIO2Q92813 273 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 HSPBAP1Q96EW2 488 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 WDR34Q96EX3 536 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 FBXL20Q96IG2 436 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 SMR3AQ99954 134 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 WWTR1Q9GZV5 400 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 OR51B5Q9H339 312 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 RPF2Q9H7B2 306 aaKnown RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 NSMCE4AQ9NXX6 385 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
CCDC78-209ENST00000474647 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
CCDC78-209ENST00000474647 DNHD1Q96M86 4753 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 AHRRA9YTQ3 701 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 OR10H2O60403 315 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ATE1O95260 518 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 EPPINO95925 133 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 CD1DP15813 335 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ALOX15P16050 662 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 EPORP19235 508 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ADSLP30566 484 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 MASP1P48740 699 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF136P52737 540 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 POU4F1Q01851 419 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TNFRSF17Q02223 184 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 CRYZQ08257 329 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 FRG1Q14331 258 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 POU4F3Q15319 338 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TMEM35AQ53FP2 167 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TMEM198Q66K66 360 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 MED27Q6P2C8 311 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 BIVMQ86UB2 503 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 PDPRQ8NCN5 879 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 LINC01560Q8TB33 94 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TSPAN17Q96FV3 270 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 CMTM7Q96FZ5 175 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TRIB1Q96RU8 372 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 PHF11Q9UIL8 331 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 CNOT11Q9UKZ1 510 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 MTO1Q9Y2Z2 717 aaKnown RBP12.84□□□□□ -0.35
CCDC78-209ENST00000474647 SLC6A5Q9Y345 797 aa12.84□□□□□ -0.35
CCDC78-209ENST00000474647 SCELO95171 688 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 CTAGE8P0CG41 777 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 EPXP11678 715 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TIMP3P35625 211 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 BUD31P41223 144 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 RPL21P46778 160 aaKnown RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 DR1Q01658 176 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 EBPQ15125 230 aaKnown RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TBCCQ15814 346 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 NTRK2Q16620 822 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 FBXL19-AS1Q494R0 122 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 BICRALQ6AI39 1079 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 OR4C11Q6IEV9 310 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TMEM64Q6YI46 380 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TAOK1Q7L7X3 1001 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 LRRC70Q7Z2Q7 622 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 GPR180Q86V85 440 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 KIF18BQ86Y91 864 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 MYLK4Q86YV6 388 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 CTAGE4Q8IX94 777 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 PM20D2Q8IYS1 436 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 ZBED8Q8IZ13 594 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 ST13P4Q8IZP2 240 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TAGAPQ8N103 731 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 UBE2E3Q969T4 207 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 RILPQ96NA2 401 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 TIMP4Q99727 224 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 YIPF4Q9BSR8 244 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
CCDC78-209ENST00000474647 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms