RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CRB2Q5IJ48 1285 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 B3GNTL1Q67FW5 361 aaPredicted RBP11.14□□□□□ -0.63
VPS13D-204ENST00000469054 H3F3CQ6NXT2 135 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 FAM180BQ6P0A1 224 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 LIX1Q8N485 282 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 KIF2BQ8N4N8 673 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 SIRT6Q8N6T7 355 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 OR1N1Q8NGS0 311 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 CLHC1Q8NHS4 586 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF721Q8TF20 911 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
VPS13D-204ENST00000469054 NCLNQ969V3 563 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 VMP1Q96GC9 406 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 SENP5Q96HI0 755 aaPredicted RBP11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ART5Q96L15 291 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 LMF1Q96S06 567 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 SEMA4CQ9C0C4 833 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 OR8D2Q9GZM6 311 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 SLC25A18Q9H1K4 315 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 REEP4Q9H6H4 257 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 SLC35C2Q9NQQ7 365 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF71Q9NQZ8 489 aaPredicted RBP11.14□□□□□ -0.63
VPS13D-204ENST00000469054 GIMAP4Q9NUV9 329 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 NOP53Q9NZM5 478 aaKnown RBP11.14□□□□□ -0.63
VPS13D-204ENST00000469054 PTGFRNQ9P2B2 879 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ENTPD4Q9Y227 616 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 TP53TG5Q9Y2B4 290 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
VPS13D-204ENST00000469054 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 AKAP10O43572 662 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ZFAND5O76080 213 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 LRATO95237 230 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 IGKV3-11P04433 115 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ATP1B1P05026 303 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 G6PDP11413 515 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 NT5EP21589 574 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 EPHA3P29320 983 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 SOX11P35716 441 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 DUSP2Q05923 314 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF267Q14586 743 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 CEBPEQ15744 281 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 OGFOD2Q6N063 350 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ISLR2Q6UXK2 745 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 FAM47EQ6ZV65 393 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ASB18Q6ZVZ8 466 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 MAVSQ7Z434 540 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 GALNT12Q8IXK2 581 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 CCDC116Q8IYX3 515 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 LRRC25Q8N386 305 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 SLC5A8Q8N695 610 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF321PQ8N8H1 164 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 DOK4Q8TEW6 326 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 FBXL20Q96IG2 436 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 MAELQ96JY0 434 aaKnown RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 BBC3Q96PG8 261 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 CNPPD1Q9BV87 410 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 DEFB126Q9BYW3 111 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 WDR55Q9H6Y2 383 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 CXorf21Q9HAI6 301 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 COPS7AQ9UBW8 275 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
VPS13D-204ENST00000469054 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-204ENST00000469054 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 MED13Q9UHV7 2174 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 GOLGA8QA0A0J9YX86 632 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 TRBV11-1A0A0K0K1C0 115 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 GOLGA8OA6NCC3 632 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 GABRR3A8MPY1 467 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 MYO1GB0I1T2 1018 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 TCP11X1B4DZS4 312 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 GOLGA8NF8WBI6 632 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 HRKO00198 91 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 TBX19O60806 448 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 TGDSO95455 350 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 CT62P0C5K7 136 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 MPIP34949 423 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 DIO3P55073 304 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 GUCY1A3Q02108 690 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 FUT7Q11130 342 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 MFAP5Q13361 173 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 PDE7AQ13946 482 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 PTGR1Q14914 329 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 PRICKLE4Q2TBC4 344 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 SLC9B1Q4ZJI4 515 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 SOWAHCQ53LP3 525 aaPredicted RBP11.12□□□□□ -0.63
VPS13D-204ENST00000469054 ABHD17BQ5VST6 288 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 FCRLBQ6BAA4 426 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 IGFL2Q6UWQ7 119 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 IGFL3Q6UXB1 125 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 HSDL2Q6YN16 418 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 LINC00696Q6ZRV3 163 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 R3HCC1LQ7Z5L2 792 aaKnown RBP11.12□□□□□ -0.63
VPS13D-204ENST00000469054 RPS19BP1Q86WX3 136 aaKnown RBP11.12□□□□□ -0.63
VPS13D-204ENST00000469054 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 OR8K3Q8NH51 312 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 SUN3Q8TAQ9 357 aa11.12□□□□□ -0.63
VPS13D-204ENST00000469054 ACTRT2Q8TDY3 377 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms