RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SCN2AQ99250 2005 aa14.23□□□□□ -0.13
SNIP1-202ENST00000468040 IGHV1-45A0A0A0MS14 117 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NSG1A0A0A6YYJ2 146 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FAM234BA2RU67 622 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 SAGE2PA6NJ88 616 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 C17orf105B2RV13 164 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NDUFAB1O14561 156 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 SLC22A2O15244 555 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NKX2-8O15522 239 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 SLITRK5O94991 958 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 HPP00738 406 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 PGRP06401 933 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 COX6A1P12074 109 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NT5EP21589 574 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 IL12AP29459 219 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FRKP42685 505 aaPredicted RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NCBP2P52298 156 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 POLR2JP52435 117 aaKnown RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 TMPRSS3P57727 454 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 KCNK10P57789 538 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 EEF1A2Q05639 463 aaKnown RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 PRSS53Q2L4Q9 553 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 SPRED3Q2MJR0 410 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 ZNF750Q32MQ0 723 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 ZNF385BQ569K4 471 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 SPANXN4Q5MJ08 99 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 C6orf163Q5TEZ5 329 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 ANXA8L1Q5VT79 327 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FAM180BQ6P0A1 224 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 PAPD4Q6PIY7 484 aaKnown RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NDUFAF7Q7L592 441 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 CCDC116Q8IYX3 515 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 OR9I1Q8NGQ6 314 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 CIDECQ96AQ7 238 aaPredicted RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FER1L6-AS2Q96M78 137 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 AMDHD1Q96NU7 426 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 TUBB6Q9BUF5 446 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 NMUR2Q9GZQ4 415 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FAM120CQ9NX05 1096 aaKnown RBP14.22□□□□□ -0.13
SNIP1-202ENST00000468040 CCDC167Q9P0B6 97 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FBXL4Q9UKA2 621 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 FREM2Q5SZK8 3169 aa14.22□□□□□ -0.13
SNIP1-202ENST00000468040 CEP295Q9C0D2 2601 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 IGHV3-20A0A0C4DH32 117 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MYOCOSA0A1B0GUC4 107 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 A0A1W2PS29 197 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 DYTNA2CJ06 578 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 TAF4O00268 1085 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 RNASET2O00584 256 aaKnown RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 DCTN3O75935 186 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 PRKAR1AP10644 381 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MANFP55145 182 aaKnown RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 LRRC74AQ0VAA2 488 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 ATP1A4Q13733 1029 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 RCAN2Q14206 197 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MLC1Q15049 377 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 PCOLCEQ15113 449 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 EXT1Q16394 746 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MPEG1Q2M385 716 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 AGKQ53H12 422 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 OR4F3Q6IEY1 312 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 GALNT12Q8IXK2 581 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 ANKS4BQ8N8V4 417 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 CCDC197Q8NCU1 140 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MORN4Q8NDC4 146 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 SUN3Q8TAQ9 357 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 PTPMT1Q8WUK0 201 aaPredicted RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 ART5Q96L15 291 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 OR52E6Q96RD3 313 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 WDR77Q9BQA1 342 aaPredicted RBP14.21□□□□□ -0.13
SNIP1-202ENST00000468040 MESP1Q9BRJ9 268 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 CXorf21Q9HAI6 301 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 SLAMF7Q9NQ25 335 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 POLHQ9Y253 713 aa14.21□□□□□ -0.13
SNIP1-202ENST00000468040 APC2O95996 2303 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 PRSS51A0A1B0GVH4 220 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 A0A1W2PRB8 838 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 A8MUA0 341 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 C9JVG2 144 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 NR5A2O00482 541 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 FCHO1O14526 889 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 IFI6P09912 130 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 ICAM2P13598 275 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 GPC1P35052 558 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 PGDP52209 483 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 DGKQP52824 942 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 RRADP55042 308 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 SLC26A5P58743 744 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 AP2B1P63010 937 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 DUSP2Q05923 314 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 MAP4K2Q12851 820 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 UBAP2LQ14157 1087 aaKnown RBP14.2□□□□□ -0.14
SNIP1-202ENST00000468040 MAPRE2Q15555 327 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 PRICKLE4Q2TBC4 344 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 PLAG1Q6DJT9 500 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 BLOC1S3Q6QNY0 202 aa14.2□□□□□ -0.14
SNIP1-202ENST00000468040 MSANTD1Q6ZTZ1 278 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms