RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 OTOP2Q7RTS6 562 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC34A3Q8N130 599 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 OR6M1Q8NGM8 313 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 CREB3L4Q8TEY5 395 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 HIST1H2AHQ96KK5 128 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 HIST1H2AJQ99878 128 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 PELOQ9BRX2 385 aaKnown RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 H2AFJQ9BTM1 129 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 LYARQ9NX58 379 aaKnown RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 SIRT5Q9NXA8 310 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 ADAM30Q9UKF2 790 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 COPS3Q9UNS2 423 aa17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 MRPS7Q9Y2R9 242 aaKnown RBP17.19■□□□□ 0.34
SNAPC3-205ENST00000467062 CYP17A1P05093 508 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SCG5P05408 212 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 OR56A5P0C7T3 313 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SDC1P18827 310 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 S100A3P33764 101 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SPINT3P49223 89 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 EPHA5P54756 1037 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 HSF2Q03933 536 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 CCSMST1Q4G0I0 132 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 HSD11B1LQ7Z5J1 315 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 CBARPQ8N350 705 aaPredicted RBP17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 VPS37AQ8NEZ2 397 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 DNAJB8Q8NHS0 232 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 ASB11Q8WXH4 323 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 ST8SIA2Q92186 375 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 ZBED6CLQ96FA7 236 aaPredicted RBP17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SIPA1Q96FS4 1042 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 FOPNLQ96NB1 174 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 MED28Q9H204 178 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 EMC7Q9NPA0 242 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC35C2Q9NQQ7 365 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 STUB1Q9UNE7 303 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 BAIAP2Q9UQB8 552 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 hCG_1807616A0A1W2PRN6 198 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 PRSS44E7EML9 344 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 HRO43593 1189 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 FKTNO75072 461 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 MAOBP27338 520 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 MAPK8P45983 427 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 MAD2L1Q13257 205 aaPredicted RBP17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 LYPLAL1Q5VWZ2 237 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 CNKSR3Q6P9H4 555 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 DOK6Q6PKX4 331 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 Q6ZPB1 254 aaPredicted RBP17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 PLPP6Q8IY26 295 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SRFBP1Q8NEF9 429 aaKnown RBP17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 B3GNT7Q8NFL0 401 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC25A46Q96AG3 418 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 CREB3L1Q96BA8 519 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 GSX2Q9BZM3 304 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 RDH14Q9HBH5 336 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 TAS2R16Q9NYV7 291 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 RPS6KA6Q9UK32 745 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 MAB21L2Q9Y586 359 aa17.18■□□□□ 0.34
SNAPC3-205ENST00000467062 ADAM11O75078 769 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ATP1B2P14415 290 aaPredicted RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 IDH2P48735 452 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 GZMMP51124 257 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ZNF284Q2VY69 593 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 TMEM215Q68D42 235 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 TRILQ7L0X0 811 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 LUZP2Q86TE4 346 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 CLDN22Q8N7P3 220 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 WDR36Q8NI36 951 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 WDR48Q8TAF3 677 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 CHTF18Q8WVB6 975 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 PCNPQ8WW12 178 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ECHDC3Q96DC8 303 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 LINC00052Q96N35 136 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SAMD11Q96NU1 681 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 DPH2Q9BQC3 489 aaPredicted RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ZFP64Q9NPA5 681 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 MS4A12Q9NXJ0 267 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 CNOT2Q9NZN8 540 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SSR3Q9UNL2 185 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 NCKAP1Q9Y2A7 1128 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 GMDSO60547 372 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 FGF18O76093 207 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ITGB7P26010 798 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 BMP8BP34820 402 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 PREPP48147 710 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 CSNK1DP48730 415 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 BTG1P62324 171 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 CHIT1Q13231 466 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SF3A2Q15428 464 aaKnown RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 HSD17B12Q53GQ0 312 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 RTL4Q6ZR62 310 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 BMP8AQ7Z5Y6 402 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 ATP6V1C2Q8NEY4 427 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC9A6Q92581 669 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 LYSMD1Q96S90 227 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 WACQ9BTA9 647 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SLC12A9Q9BXP2 914 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 SAV1Q9H4B6 383 aaPredicted RBP17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 NT5DC2Q9H857 520 aa17.17■□□□□ 0.34
SNAPC3-205ENST00000467062 HHATLQ9HCP6 504 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms