RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	LRTM1	Q9HBL6	345 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	TMBIM4	Q9HC24	238 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	GIMAP4	Q9NUV9	329 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	PSME2	Q9UL46	239 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ERVK-11	Q9UQG0	969 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ERVK-19	Q9WJR5	959 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	PCDHA9	Q9Y5H5	950 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ACTL7B	Q9Y614	415 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	COPG1	Q9Y678	874 aa	Known RBP	8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF780B	Q9Y6R6	833 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ESPL1	Q14674	2120 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZGRF1	Q86YA3	2104 aa		8.95	□□□□□ -0.98
PSMD4-208	ENST00000462970	CYSRT1	A8MQ03	144 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	TMEM114	B3SHH9	223 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	HRK	O00198	91 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	PIP5K1B	O14986	540 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	BIRC5	O15392	142 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ITM2A	O43736	263 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	PRAMEF2	O60811	474 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	VPS4B	O75351	444 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ITGA10	O75578	1167 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	RSL1D1	O76021	490 aa	Known RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC35E2	P0CK97	266 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	CPM	P14384	443 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	POR	P16435	677 aa	Predicted RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	SERPINB5	P36952	375 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	SSR4	P51571	173 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	MLF1	P58340	268 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ABCE1	P61221	599 aa	Known RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	TRA2B	P62995	288 aa	Known RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	RPL38	P63173	70 aa	Known RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF763	Q0D2J5	394 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	C2orf80	Q0P641	193 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	STX3	Q13277	289 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	BIK	Q13323	160 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR1C1	Q15619	314 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF766	Q5HY98	468 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	NOXRED1	Q6NXP6	359 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC48A1	Q6P1K1	146 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM180A	Q6UWF9	173 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	RNF111	Q6ZNA4	994 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	HDX	Q7Z353	690 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	TRIM46	Q7Z4K8	759 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ATCAY	Q86WG3	371 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	GALNT12	Q8IXK2	581 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	HORMAD2	Q8N7B1	307 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	C7orf57	Q8NEG2	295 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ADCY4	Q8NFM4	1077 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	CLHC1	Q8NHS4	586 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	HAS2	Q92819	552 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	BBS4	Q96RK4	519 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	BRINP2	Q9C0B6	783 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF395	Q9H8N7	513 aa	Predicted RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	MIEF1	Q9NQG6	463 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ASF1B	Q9NVP2	202 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	C1orf109	Q9NX04	203 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	LRFN1	Q9P244	771 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	HEY2	Q9UBP5	337 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	GIMAP2	Q9UG22	337 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	BCAP29	Q9UHQ4	241 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF223	Q9UK11	482 aa	Predicted RBP	8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	UTS2R	Q9UKP6	389 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	VPS4A	Q9UN37	437 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ENTPD4	Q9Y227	616 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	PCDHGA10	Q9Y5H3	936 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	DNAJC15	Q9Y5T4	150 aa		8.94	□□□□□ -0.98
PSMD4-208	ENST00000462970	ATP6AP2	A0A1C7CYW4	349 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SERTM1	A2A2V5	107 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	AKAP10	O43572	662 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	PEX11A	O75192	247 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ATP6AP2	O75787	350 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	OR2J2	O76002	312 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	LRAT	O95237	230 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	DRD2	P14416	443 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CD46	P15529	392 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CSNK2A2	P19784	350 aa	Predicted RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SSTR4	P31391	388 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ARRB2	P32121	409 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC1A6	P48664	564 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CYB561	P49447	251 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	HLCS	P50747	726 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	GPR143	P51810	404 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	HK2	P52789	917 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	RNF4	P78317	190 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SRSF11	Q05519	484 aa	Known RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	HEPACAM	Q14CZ8	416 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	LTB4R	Q15722	352 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	PDCD2	Q16342	344 aa	Predicted RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	MAPKAPK3	Q16644	382 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	TNFAIP8L3	Q5GJ75	292 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	ZNF468	Q5VIY5	522 aa	Predicted RBP	8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CES4A	Q5XG92	561 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	HLA-DQA1	Q5Y7H0	255 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SPINK14	Q6IE38	97 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	FAM111B	Q6SJ93	734 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	IL20RB	Q6UXL0	311 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	SLC29A4	Q7RTT9	530 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	LGI4	Q8N135	537 aa		8.93	□□□□□ -0.98
PSMD4-208	ENST00000462970	CYP4Z2P	Q8N1L4	340 aa		8.93	□□□□□ -0.98

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms