RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LYNP07948 512 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 SFTPBP07988 381 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TPBGLP0DKB5 382 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 EZRP15311 586 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 FERP16591 822 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 STMN1P16949 149 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 AHCYP23526 432 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 STIP1P31948 543 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 TNFRSF4P43489 277 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 MTIF2P46199 727 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 PITPNBP48739 271 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TKTL1P51854 596 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 LIMK2P53671 638 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 SLC12A3P55017 1021 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 CASP9P55211 416 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 RPS27AP62979 156 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 ITPK1Q13572 414 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 EXOSC7Q15024 291 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 KRT31Q15323 416 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 SNAI3Q3KNW1 292 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 POM121L1PQ3SYA9 428 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 NKAIN2Q5VXU1 208 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 ZNF343Q6P1L6 599 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 METTL7BQ6UX53 244 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 MCM10Q7L590 875 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 ADAMTSL2Q86TH1 951 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TBC1D10CQ8IV04 446 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 LMNTD2Q8IXW0 634 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 PARP8Q8N3A8 854 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 GVQW1Q8N7I0 195 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 ZNRF1Q8ND25 227 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 EXOC6Q8TAG9 804 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 CHPT1Q8WUD6 406 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 P3H4Q92791 437 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 PNPLA2Q96AD5 504 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 RAB39BQ96DA2 213 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 CXorf58Q96LI9 332 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 CCDC28BQ9BUN5 200 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TRIM15Q9C019 465 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TRPV6Q9H1D0 765 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 TUBB1Q9H4B7 451 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 WDR41Q9HAD4 459 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 KCNK13Q9HB14 408 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 ANO10Q9NW15 660 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 THYN1Q9P016 225 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 NARFQ9UHQ1 456 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 MRTO4Q9UKD2 239 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 DIMT1Q9UNQ2 313 aaKnown RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 RICTORQ6R327 1708 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 BLMP54132 1417 aaPredicted RBP2.76□□□□□ -1.97
RFC4-211ENST00000460408 FGD6Q6ZV73 1430 aa2.76□□□□□ -1.97
RFC4-211ENST00000460408 GPRASP1Q5JY77 1395 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 ABCA9Q8IUA7 1624 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 NINLQ9Y2I6 1382 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CEP170BQ9Y4F5 1589 aaPredicted RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 A0A1B0GU03 582 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 LOC390937A0A1W2PQ73 354 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 MACROD2A1Z1Q3 448 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CCDC69A6NI79 296 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 ASB14A6NK59 587 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 E9PQ18 207 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 FBP2O00757 339 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 PI15O43692 258 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 GMNNO75496 209 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 SORBS2O94875 1100 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 OR6A2O95222 327 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CXCL10P02778 98 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 ADORA3P0DMS8 318 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CD1DP15813 335 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 RPL9P32969 192 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 ETV5P41161 510 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 ALDH3B1P43353 468 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 NSFP46459 744 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 ATP4BP51164 291 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 HNRNPFP52597 415 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 GEMP55040 296 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 NDUFV3P56181 108 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 SRP54P61011 504 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 SRPXP78539 464 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CCZ1BP86790 482 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CCZ1P86791 482 aaPredicted RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 GALK2Q01415 458 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 SLC17A1Q14916 467 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 SIX1Q15475 284 aaPredicted RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 PKN2Q16513 984 aaKnown RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 CCL14Q16627 93 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 MPPE1Q53F39 396 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 HERC4Q5GLZ8 1057 aaPredicted RBP2.75□□□□□ -1.97
RFC4-211ENST00000460408 DCAF12Q5T6F0 453 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 C1orf189Q5VU69 101 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 RAB12Q6IQ22 244 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 Q6ZRG5 221 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 RPAINQ86UA6 219 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 SLC22A16Q86VW1 577 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 TMEM185AQ8NFB2 350 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 OR8H1Q8NGG4 311 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 KIAA1524Q8TCG1 905 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 SLC13A3Q8WWT9 602 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 CAPNS2Q96L46 248 aa2.75□□□□□ -1.97
RFC4-211ENST00000460408 RUNDC3BQ96NL0 473 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms