RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TEX10Q9NXF1 929 aaPredicted RBP14.13□□□□□ -0.15
CHD3-205ENST00000449744 TMEM216Q9P0N5 145 aa14.13□□□□□ -0.15
CHD3-205ENST00000449744 ADAM29Q9UKF5 820 aa14.13□□□□□ -0.15
CHD3-205ENST00000449744 PINLYPA6NC86 204 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 OR6C76A6NM76 312 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 E9PLN8 166 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 PGRMC2O15173 223 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 ZNF354AO60765 605 aaPredicted RBP14.12□□□□□ -0.15
CHD3-205ENST00000449744 SBK3P0C264 359 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 FAM153BP0C7A2 387 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 GCAP28676 217 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 GALNSP34059 522 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 MAPK12P53778 367 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 CLCQ05315 142 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 SLC29A2Q14542 456 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 FAM153CQ494X1 144 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 NDUFAF5Q5TEU4 345 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 C3P1Q6ZMU1 363 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 FGD2Q7Z6J4 655 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 CD163Q86VB7 1156 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 CHERPQ8IWX8 916 aaKnown RBP14.12□□□□□ -0.15
CHD3-205ENST00000449744 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 METTL4Q8N3J2 472 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 TMEM151AQ8N4L1 468 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 OR4K14Q8NGD5 310 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 PHF10Q8WUB8 498 aaKnown RBP14.12□□□□□ -0.15
CHD3-205ENST00000449744 UCN3Q969E3 161 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 VKORC1Q9BQB6 163 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 TTTY12Q9BZ98 90 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 IL1RL2Q9HB29 575 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
CHD3-205ENST00000449744 TRPS1Q9UHF7 1281 aa14.12□□□□□ -0.15
CHD3-205ENST00000449744 A0A0G2JMM0 328 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 A0A1W2PPB8 328 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 A0A1W2PRS3 328 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 KIR3DP1A8MWS1 328 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 PPP6CO00743 305 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 OR4F21O95013 312 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 CLDN14O95500 239 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 PDYNP01213 254 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 CCL3P10147 92 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 GRNP28799 593 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 HSD17B3P37058 310 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 DNASE1L1P49184 302 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 TBL3Q12788 808 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 ZNF630Q2M218 657 aaPredicted RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 HLA-DQA1Q5Y7H0 255 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 SLC22A10Q63ZE4 541 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 LETMD1Q6P1Q0 360 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 NCCRP1Q6ZVX7 275 aaPredicted RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 GALNT12Q8IXK2 581 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 TAGAPQ8N103 731 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 SPACA9Q96E40 222 aaPredicted RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 WWTR1Q9GZV5 400 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 BRF2Q9HAW0 419 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 FARSBQ9NSD9 589 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 RYDENQ9NUL5 291 aaKnown RBP14.11□□□□□ -0.15
CHD3-205ENST00000449744 COQ3Q9NZJ6 369 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 FETUBQ9UGM5 382 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 TBK1Q9UHD2 729 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 GTF3C1Q12789 2109 aa14.11□□□□□ -0.15
CHD3-205ENST00000449744 A0A1B0GTL3 188 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 C2orf92A0A1B0GVN3 265 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 GOLGA8RI6L899 631 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 DLX3O60479 287 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 NADKO95544 446 aaPredicted RBP14.1□□□□□ -0.15
CHD3-205ENST00000449744 KRT6AP02538 564 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 KRT6BP04259 564 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 NT5EP21589 574 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 SERPINB3P29508 390 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 HMOX2P30519 316 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 KRT6CP48668 564 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 XKP51811 444 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 SLC37A1P57057 533 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 EBPQ15125 230 aaKnown RBP14.1□□□□□ -0.15
CHD3-205ENST00000449744 RASA2Q15283 850 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 ZNF791Q3KP31 576 aaPredicted RBP14.1□□□□□ -0.15
CHD3-205ENST00000449744 UNC50Q53HI1 259 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 ZNF678Q5SXM1 525 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 TMEM211Q6ICI0 200 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 COMMD6Q7Z4G1 85 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 SLC22A9Q8IVM8 553 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 FAM109AQ8N4B1 249 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 CDYL2Q8N8U2 506 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 FAM13CQ8NE31 585 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 TP63Q9H3D4 680 aaPredicted RBP14.1□□□□□ -0.15
CHD3-205ENST00000449744 ZDHHC11Q9H8X9 412 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 PLSCR2Q9NRY7 297 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 STK38LQ9Y2H1 464 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 PCDHA9Q9Y5H5 950 aa14.1□□□□□ -0.15
CHD3-205ENST00000449744 C1orf226A1L170 272 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 GOLGA6L10A6NI86 522 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 CAPN14A8MX76 684 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 GLSO94925 669 aaPredicted RBP14.09□□□□□ -0.15
CHD3-205ENST00000449744 GSTA1P08263 222 aa14.09□□□□□ -0.15
CHD3-205ENST00000449744 PYGBP11216 843 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms