RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 C3AR1Q16581 482 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 LPAL2Q16609 132 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC57Q2TAC2 916 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 TMEM270Q6UE05 265 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 METTL7BQ6UX53 244 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 KCTD9Q7L273 389 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 LAX1Q8IWV1 398 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 CCDC170Q8IYT3 715 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 RNF149Q8NC42 400 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 LRRC15Q8TF66 581 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 TAF15Q92804 592 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 C11orf52Q96A22 123 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 AP2M1Q96CW1 435 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 LGMNQ99538 433 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 UBXN6Q9BZV1 441 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 C3orf14Q9HBI5 128 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF510Q9Y2H8 683 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 ABCC12Q96J65 1359 aa3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 COL14A1Q05707 1796 aaKnown RBP3.71□□□□□ -1.82
HMGB3P6-201ENST00000444896 TOGARAM1Q9Y4F4 1720 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 IGKV3D-20A0A0C4DH25 116 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 C13orf42A0A1B0GVH6 325 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 C2orf92A0A1B0GVN3 265 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 A0A1W2PPR1 153 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 GOLGA6L4A6NEF3 574 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 H3BQV1 296 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 TNFSF12O43508 249 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 PI15O43692 258 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 CLN5O75503 358 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 MTRF1O75570 445 aaKnown RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 CRCPO75575 148 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 PTMAP06454 111 aaKnown RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 THEGLP0DJG4 465 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 UROSP10746 265 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ODC1P11926 461 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 OR1D2P34982 312 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 KHKP50053 298 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ABCE1P61221 599 aaKnown RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 HMGN5P82970 282 aaKnown RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC34A1Q06495 639 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC3A1Q07837 685 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF674Q2M3X9 581 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC39A12Q504Y0 691 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 PRAMEF8Q5VWM4 474 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZSCAN25Q6NSZ9 544 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 RFPL4BQ6ZWI9 263 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF589Q86UQ0 364 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZSCAN30Q86W11 494 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 IQCA1Q86XH1 822 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 NUP93Q8N1F7 819 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 OR52B6Q8NGF0 335 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 OR13C5Q8NGS8 318 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 MIPOL1Q8TD10 442 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 GPR148Q8TDV2 347 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SSC4DQ8WTU2 575 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 NAP1L5Q96NT1 182 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 MTIF3Q9H2K0 278 aaKnown RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZDHHC6Q9H6R6 413 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 RRAGDQ9NQL2 400 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 SPG21Q9NZD8 308 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 MUTYHQ9UIF7 546 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 PSORS1C1Q9UIG5 152 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ETV7Q9Y603 341 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 STRCQ7RTU9 1775 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 WNK3Q9BYP7 1800 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ELP1O95163 1332 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 CDHR2Q9BYE9 1310 aa3.7□□□□□ -1.82
HMGB3P6-201ENST00000444896 ANKRD36CQ5JPF3 1778 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 A0A1B0GUL7 405 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ATP6AP2A0A1C7CYW4 349 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 LRRD1A4D1F6 860 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ASB14A6NK59 587 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 TCP10L2B9ZVM9 353 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 RNF113AO15541 343 aaKnown RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 AKAP3O75969 853 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 FGF19O95750 216 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 CALCAP01258 141 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 PCCAP05165 728 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 SKILP12757 684 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ACKR3P25106 362 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 TAF6P49848 677 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 SERPINH1P50454 418 aaKnown RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 PAX8Q06710 450 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 KIAA0141Q14154 515 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZNF146Q15072 292 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC1A5Q15758 541 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 MLF2Q15773 248 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ACKR1Q16570 336 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 SMU1Q2TAY7 513 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 KCTD11Q693B1 232 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 GPRIN3Q6ZVF9 776 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 Q71RC1 249 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 FAM131BQ86XD5 332 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 GGHQ92820 318 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 FAM46BQ96A09 425 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 SLC45A3Q96JT2 553 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 LLPHQ9BRT6 129 aaKnown RBP3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 OSBPL8Q9BZF1 889 aa3.69□□□□□ -1.82
HMGB3P6-201ENST00000444896 ZSCAN16Q9H4T2 348 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms