RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 SYNDIG1LA6NDD5 238 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CDRT15L2A8MXV6 281 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 PLD2O14939 933 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 GSC2O15499 205 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 PRKRAO75569 313 aaKnown RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 TIAF1O95411 115 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 SLC5A2P31639 672 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 RORAP35398 523 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 HSD17B7P56937 341 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 NFATC3Q12968 1075 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CLN3Q13286 438 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 PRAMEF17Q5VTA0 474 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 CPZQ66K79 652 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CEACAM20Q6UY09 585 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 BNC2Q6ZN30 1099 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 RAB11FIP2Q7L804 512 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CLECL1Q8IZS7 167 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 OR4K14Q8NGD5 310 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 OR51Q1Q8NH59 317 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CIDECQ96AQ7 238 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 TBC1D20Q96BZ9 403 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CNRIP1Q96F85 164 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 AMDHD1Q96NU7 426 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 ANKRD27Q96NW4 1050 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 RAB3IPQ96QF0 476 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 SH3GL1Q99961 368 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 DPH2Q9BQC3 489 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 INPP5KQ9BT40 448 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 CADM1Q9BY67 442 aaKnown RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 B3GNT4Q9C0J1 378 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 SLC7A5P2Q9GIP4 190 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 APMAPQ9HDC9 416 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 MKKSQ9NPJ1 570 aaPredicted RBP12.63□□□□□ -0.39
SF1-210ENST00000443908 SLAMF7Q9NQ25 335 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 VAPAQ9P0L0 249 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 HCN3Q9P1Z3 774 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 C5AR2Q9P296 337 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 NDOR1Q9UHB4 597 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 MMACHCQ9Y4U1 282 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 ZNF780BQ9Y6R6 833 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 ATMQ13315 3056 aa12.63□□□□□ -0.39
SF1-210ENST00000443908 COL6A6A6NMZ7 2263 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 IGLV3-12A0A075B6K2 115 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 GLOD5A6NK44 160 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 CLDN4O14493 209 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 DNAJA2O60884 412 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 SLITRK5O94991 958 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 GPR75O95800 540 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 C6orf47O95873 294 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 FHP07954 510 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 JMJD7P0C870 316 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 CCL4P13236 92 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 ALAS2P22557 587 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 PPIBP23284 216 aaKnown RBP12.62□□□□□ -0.39
SF1-210ENST00000443908 SLC6A2P23975 617 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 MPIP34949 423 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 CDKN2CP42773 168 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 HBA1P69905 142 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 BIKQ13323 160 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 RUNDC3AQ59EK9 446 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 TMEM64Q6YI46 380 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 SCUBE1Q8IWY4 988 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 MSRB3Q8IXL7 192 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 LRRC25Q8N386 305 aaPredicted RBP12.62□□□□□ -0.39
SF1-210ENST00000443908 KIF2BQ8N4N8 673 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 TMEM52Q8NDY8 209 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 OR4A15Q8NGL6 344 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 SUN3Q8TAQ9 357 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 UCN3Q969E3 161 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 MCUR1Q96AQ8 359 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 FKBP10Q96AY3 582 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 CLIP3Q96DZ5 547 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 PEX11GQ96HA9 241 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 BBS4Q96RK4 519 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 CPPED1Q9BRF8 314 aaPredicted RBP12.62□□□□□ -0.39
SF1-210ENST00000443908 TGIF2Q9GZN2 237 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 SLC25A37Q9NYZ2 338 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 SLAMF8Q9P0V8 285 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 TMEM181Q9P2C4 612 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 VPS4AQ9UN37 437 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 PCDHB14Q9Y5E9 798 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 PCDHGA3Q9Y5H0 932 aa12.62□□□□□ -0.39
SF1-210ENST00000443908 PIEZO2Q9H5I5 2752 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 FGF17O60258 216 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 CTNSO60931 367 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 ERAL1O75616 437 aaKnown RBP12.61□□□□□ -0.39
SF1-210ENST00000443908 WISP1O95388 367 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 ANP32DO95626 131 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 ATP1B1P05026 303 aa12.61□□□□□ -0.39
SF1-210ENST00000443908 CYC1P08574 325 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms