RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZCCHC7Q8N3Z6 543 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SLC15A4Q8N697 577 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ACOT4Q8N9L9 421 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 C19orf47Q8N9M1 422 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 TSPAN14Q8NG11 270 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 OR8K5Q8NH50 307 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 MAP3K3Q99759 626 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 CCDC3Q9BQI4 270 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 INPP5KQ9BT40 448 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 THUMPD3Q9BV44 507 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ALG2Q9H553 416 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GAREM1Q9H706 876 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 RPF2Q9H7B2 306 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 IFT22Q9H7X7 185 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 EPHA6Q9UF33 1036 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 BTNL2Q9UIR0 455 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 DTNAQ9Y4J8 743 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 TDRD6O60522 2096 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 LOC105369274A0A096LPK9 316 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 LOC102723532A0A0G2JNH3 316 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SLC9B1P1A6NJY1 282 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 CPSF4O95639 269 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 B3GALT4O96024 378 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GSNP06396 782 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 DDCP20711 480 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GPR3P46089 330 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ALDH9A1P49189 494 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GSK3BP49841 420 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 TPTEP56180 551 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 MTPNP58546 118 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 MS4A2Q01362 244 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 LIPEQ05469 1076 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 BNIP2Q12982 314 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 GTDC1Q4AE62 458 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ZNF385BQ569K4 471 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 IGSF11Q5DX21 431 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ZC3H12BQ5HYM0 836 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 MANEAQ5SRI9 462 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 PRR23CQ6ZRP0 262 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 IFNEQ86WN2 208 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 OR4N4Q8N0Y3 316 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 AMER3Q8N944 861 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 Q8N9G6 341 aaPredicted RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 HIPK4Q8NE63 616 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 LHFPL5Q8TAF8 219 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SAP25Q8TEE9 199 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ZDHHC12Q96GR4 267 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 CCDC115Q96NT0 180 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 TGM7Q96PF1 710 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SECISBP2Q96T21 854 aaKnown RBP7.65□□□□□ -1.18
CCDC39-201ENST00000442201 CD180Q99467 661 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 FAIM2Q9BWQ8 316 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 ROGDIQ9GZN7 287 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 RAB33BQ9H082 229 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 CAPN10Q9HC96 672 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 FSCN3Q9NQT6 498 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 SLC25A37Q9NYZ2 338 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 PCDHB14Q9Y5E9 798 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 AP4B1Q9Y6B7 739 aa7.65□□□□□ -1.18
CCDC39-201ENST00000442201 TRBV5-3A0A0A0MS03 114 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 TLCD2A6NGC4 264 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 TRIM64A6NGJ6 449 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 C4orf51C9J302 202 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 RNASET2O00584 256 aaKnown RBP7.65□□□□□ -1.19
CCDC39-201ENST00000442201 ACOT8O14734 319 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 BCAS2O75934 225 aaPredicted RBP7.65□□□□□ -1.19
CCDC39-201ENST00000442201 DRD2P14416 443 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF10P21506 573 aaPredicted RBP7.65□□□□□ -1.19
CCDC39-201ENST00000442201 BTN3A2P78410 334 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 CDC20Q12834 499 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 SLAMF1Q13291 335 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 CCNIQ14094 377 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 RUNDC3AQ59EK9 446 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 TRIM61Q5EBN2 209 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 CLVS2Q5SYC1 327 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 ATAD3BQ5T9A4 648 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 ZNF621Q6ZSS3 439 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 FAM92BQ6ZTR7 304 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 KANSL1Q7Z3B3 1105 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 AMIGO2Q86SJ2 522 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 MSRB3Q8IXL7 192 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 CLECL1Q8IZS7 167 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 C7orf57Q8NEG2 295 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 SLC26A7Q8TE54 656 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 UTP15Q8TED0 518 aaKnown RBP7.65□□□□□ -1.19
CCDC39-201ENST00000442201 TCTN2Q96GX1 697 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 SNX18Q96RF0 628 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 KCTD14Q9BQ13 255 aaPredicted RBP7.65□□□□□ -1.19
CCDC39-201ENST00000442201 NLNQ9BYT8 704 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 PCDHAC1Q9H158 963 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 FAM60AQ9NP50 221 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 NUP50Q9UKX7 468 aa7.65□□□□□ -1.19
CCDC39-201ENST00000442201 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 IGHV1OR21-1A0A087WYE8 117 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 A8MU76 341 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 PATE3B3GLJ2 98 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 P2RX6O15547 441 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 DUX1O43812 170 aa7.64□□□□□ -1.19
CCDC39-201ENST00000442201 TBX19O60806 448 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms