RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OR52N2Q8NGI0 321 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 ELF5Q9UKW6 265 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-203ENST00000441443 CDH10Q9Y6N8 788 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 AP1M2Q9Y6Q5 423 aa19.28■□□□□ 0.68
SHOX2-203ENST00000441443 LINC00862A6NCI5 91 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 ZNF840PA6NDX5 716 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 RFXAPO00287 272 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 AKAP8O43823 692 aaKnown RBP19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SOAT1P35610 550 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 NSG1P42857 185 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 ESX1Q8N693 406 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 OR8J1Q8NGP2 316 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 C11orf24Q96F05 449 aaPredicted RBP19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SENP5Q96HI0 755 aaPredicted RBP19.27■□□□□ 0.68
SHOX2-203ENST00000441443 LINC00597Q9H2U6 94 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SGK2Q9HBY8 427 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 HOXD10P28358 340 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 RGS1Q08116 209 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 ILKQ13418 452 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 INSL4Q14641 139 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SNAPC1Q16533 368 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 PLK5Q496M5 336 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 KLHL22Q53GT1 634 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 TMEM201Q5SNT2 666 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 ASB18Q6ZVZ8 466 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SHFQ7M4L6 423 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 OR6C4Q8NGE1 309 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 MED8Q96G25 268 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 SAMD11Q96NU1 681 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 POLR2J3Q9H1A7 115 aaKnown RBP19.27■□□□□ 0.68
SHOX2-203ENST00000441443 ZNF222Q9UK12 451 aa19.27■□□□□ 0.68
SHOX2-203ENST00000441443 A0A0A6YYJ9 748 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 A0A1B0GVM2 712 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.27■□□□□ 0.67
SHOX2-203ENST00000441443 STC2O76061 302 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 CBSLP0DN79 551 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 CBSP35520 551 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 SPAM1P38567 509 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 BCL2L15Q5TBC7 163 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 UNC5DQ6UXZ4 953 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.27■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF224Q9NZL3 707 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 TRPM5Q9NZQ8 1165 aa19.27■□□□□ 0.67
SHOX2-203ENST00000441443 SAP18O00422 153 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 RNASET2O00584 256 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SLC30A4O14863 429 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SEMA7AO75326 666 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 ADAP00813 363 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 LHCGRP22888 699 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 ASMTP46597 345 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 EVX1P49640 407 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 HNMTP50135 292 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 EEF1A2Q05639 463 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SF3A2Q15428 464 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 CRB2Q5IJ48 1285 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 C12orf73Q69YU5 71 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 TMEM65Q6PI78 240 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 B3GLCTQ6Y288 498 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 CDH24Q86UP0 819 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 RBM45Q8IUH3 476 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SOSTQ9BQB4 213 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 CHP2O43745 196 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 MTX2O75431 263 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 RAB36O95755 333 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 CD79BP40259 229 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 ATP13A5Q4VNC0 1218 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SERPINA13PQ6UXR4 307 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 OTOP2Q7RTS6 562 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 OR11H4Q8NGC9 324 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 TMEM163Q8TC26 289 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 FOXJ1Q92949 421 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 MARVELD3Q96A59 401 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 LRR1Q96L50 414 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 MAGEB10Q96LZ2 347 aaPredicted RBP19.26■□□□□ 0.67
SHOX2-203ENST00000441443 GPR137Q96N19 417 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 HDHD2Q9H0R4 259 aa19.26■□□□□ 0.67
SHOX2-203ENST00000441443 SMAD6O43541 496 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 PCSK2P16519 638 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 IRS1P35568 1242 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 PMEPA1Q969W9 287 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 SLC22A12Q96S37 553 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 TRAF4Q9BUZ4 470 aaPredicted RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 DIMT1Q9UNQ2 313 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 SF3B6Q9Y3B4 125 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 C8GP07360 202 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 ZDHHC11BP0C7U3 371 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 CTRB1P17538 263 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 WNT4P56705 351 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 RPS26P62854 115 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 ELAVL2Q12926 359 aaKnown RBP19.25■□□□□ 0.67
SHOX2-203ENST00000441443 NOGQ13253 232 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 FGFBP1Q14512 234 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 CDKL4Q5MAI5 379 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 DCST1Q5T197 706 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 IER5LQ5T953 404 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 LYPLAL1Q5VWZ2 237 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 LIPJQ5W064 366 aa19.25■□□□□ 0.67
SHOX2-203ENST00000441443 CTRB2Q6GPI1 263 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms