RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 MARVELD3Q96A59 401 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 DEFB127Q9H1M4 99 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 DEPPQ9NTK1 212 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 TMEM216Q9P0N5 145 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 TRPS1Q9UHF7 1281 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 ADAM29Q9UKF5 820 aa18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 KLF2Q9Y5W3 355 aaPredicted RBP18.37■□□□□ 0.53
SHROOM1-204ENST00000440118 A0A0G2JMM0 328 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 A0A1W2PPB8 328 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 A0A1W2PRS3 328 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 KIR3DP1A8MWS1 328 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF500O60304 480 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 OR4F21O95013 312 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 PDYNP01213 254 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 KRT6AP02538 564 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 KRT6BP04259 564 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 IGKV3-11P04433 115 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM153BP0C7A2 387 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC35E2P0CK97 266 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 HTR1EP28566 365 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 GCAP28676 217 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 HMOX2P30519 316 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 KRT6CP48668 564 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 RASA2Q15283 850 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM153CQ494X1 144 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 CMPK2Q5EBM0 449 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 NDUFAF5Q5TEU4 345 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 RGS9BPQ6ZS82 235 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 GPRIN3Q6ZVF9 776 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 COMMD6Q7Z4G1 85 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 CDYL2Q8N8U2 506 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM13CQ8NE31 585 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 OR4K14Q8NGD5 310 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 OR52N2Q8NGI0 321 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 HBEGFQ99075 208 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 TTTY12Q9BZ98 90 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 WWTR1Q9GZV5 400 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 BRF2Q9HAW0 419 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 FARSBQ9NSD9 589 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 STK38LQ9Y2H1 464 aa18.36■□□□□ 0.53
SHROOM1-204ENST00000440118 PINLYPA6NC86 204 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 OR6C76A6NM76 312 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 WASHC1A8K0Z3 465 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 ESRRBO95718 433 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 CNR1P21554 472 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 NT5EP21589 574 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 ATP5F1P24539 256 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 KCNJ2P63252 427 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 ADORA2A-AS1P86434 159 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 PIGGQ5H8A4 983 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 SP5Q6BEB4 398 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 DOLPP1Q86YN1 238 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC22A9Q8IVM8 553 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 TAGAPQ8N103 731 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 METTL4Q8N3J2 472 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 ACMSDQ8TDX5 336 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 UBLCP1Q8WVY7 318 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 SPACA9Q96E40 222 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 TMEM237Q96Q45 408 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 PHF12Q96QT6 1004 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 C1QTNF3Q9BXJ4 246 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 EXO5Q9H790 373 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 CHST11Q9NPF2 352 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 FETUBQ9UGM5 382 aa18.35■□□□□ 0.53
SHROOM1-204ENST00000440118 A0A1B0GTL3 188 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 GOLGA6L10A6NI86 522 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 E9PLN8 166 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 PPP6CO00743 305 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 PGRMC2O15173 223 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 SBK3P0C264 359 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 CCL3P10147 92 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 PYGBP11216 843 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 SERPINB3P29508 390 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 HSD17B3P37058 310 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 DNASE1L1P49184 302 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 ALDH9A1P49189 494 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 XKP51811 444 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF678Q5SXM1 525 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC22A10Q63ZE4 541 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 DND1Q8IYX4 353 aaKnown RBP18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 FAM109AQ8N4B1 249 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 SLC15A4Q8N697 577 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 ZNF382Q96SR6 550 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 VKORC1Q9BQB6 163 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 FAIM2Q9BWQ8 316 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 IL1RL2Q9HB29 575 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 COQ3Q9NZJ6 369 aa18.34■□□□□ 0.53
SHROOM1-204ENST00000440118 C2orf92A0A1B0GVN3 265 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 C1orf226A1L170 272 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 CCDC151A5D8V7 595 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 SMIM23A6NLE4 172 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 DLX3O60479 287 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 ZNF354AO60765 605 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 ERAL1O75616 437 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 GSTA1P08263 222 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 CPMP14384 443 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 SSTR4P31391 388 aa18.33■□□□□ 0.52
SHROOM1-204ENST00000440118 GALNSP34059 522 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms