RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CDK9P50750 372 aaKnown RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 BTG2P78543 158 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 OCA2Q04671 838 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 GAB1Q13480 694 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 RABL3Q5HYI8 236 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 TMEM164Q5U3C3 297 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 OVCH1Q7RTY7 1134 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 ZFP90Q8TF47 636 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 CPPED1Q9BRF8 314 aaPredicted RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 SEMA3GQ9NS98 782 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 SIRT3Q9NTG7 399 aaPredicted RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 C14orf105Q9NVL8 296 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 CMTM6Q9NX76 183 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 IFT80Q9P2H3 777 aaPredicted RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 CLIC1O00299 241 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 ALBP02768 609 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 ATP1B1P05026 303 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 SLC35E2P0CK97 266 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 PPIBP23284 216 aaKnown RBP21.58■■□□□ 1.05
CPSF4-204ENST00000436336 SOAT1P35610 550 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 MTPNP58546 118 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 CPZQ66K79 652 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 OR9A2Q8NGT5 310 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 STT3BQ8TCJ2 826 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 UTP4Q969X6 686 aaKnown RBP21.58■■□□□ 1.05
CPSF4-204ENST00000436336 FKBP10Q96AY3 582 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 AURKBQ96GD4 344 aaPredicted RBP21.58■■□□□ 1.05
CPSF4-204ENST00000436336 SLC35A5Q9BS91 424 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 TRIM8Q9BZR9 551 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 SLC26A1Q9H2B4 701 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 TPT1P8Q9HAU6 139 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 CTSFQ9UBX1 484 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 AP3M1Q9Y2T2 418 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 CLDN16Q9Y5I7 305 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 SNX8Q9Y5X2 465 aa21.58■■□□□ 1.05
CPSF4-204ENST00000436336 TGFBR3LH3BV60 316 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 NME4O00746 187 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 SERTAD2Q14140 314 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 MINDY4Q4G0A6 757 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 PIGGQ5H8A4 983 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 SAMD4BQ5PRF9 694 aaKnown RBP21.58■■□□□ 1.04
CPSF4-204ENST00000436336 MFSD4BQ5TF39 518 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 PGM2L1Q6PCE3 622 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 TMEM64Q6YI46 380 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 ULK2Q8IYT8 1036 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 ST13P4Q8IZP2 240 aaPredicted RBP21.58■■□□□ 1.04
CPSF4-204ENST00000436336 GALNT15Q8N3T1 639 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 CLPTM1LQ96KA5 538 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 PTCHD1Q96NR3 888 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 THUMPD3Q9BV44 507 aaKnown RBP21.58■■□□□ 1.04
CPSF4-204ENST00000436336 ALOXE3Q9BYJ1 711 aa21.58■■□□□ 1.04
CPSF4-204ENST00000436336 KNTC1P50748 2209 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 EVPLLA8MZ36 301 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 C9orf172C9J069 976 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 STK17BO94768 372 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 SLITRK5O94991 958 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 MAOAP21397 527 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 SELPLGQ14242 412 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 SPATS1Q496A3 300 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 ZNF517Q6ZMY9 492 aaPredicted RBP21.57■■□□□ 1.04
CPSF4-204ENST00000436336 FBXW8Q8N3Y1 598 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 MOAP1Q96BY2 351 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 B3GNT4Q9C0J1 378 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 IKZF5Q9H5V7 419 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 NECTIN3Q9NQS3 549 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 PCDHGA8Q9Y5G5 932 aa21.57■■□□□ 1.04
CPSF4-204ENST00000436336 RNF103-CHMP3A0A140T963 221 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 OR2W5A6NFC9 320 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 ZGLP1P0C6A0 271 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 EEFSECP57772 596 aaKnown RBP21.56■■□□□ 1.04
CPSF4-204ENST00000436336 RHAGQ02094 409 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 CEACAM7Q14002 265 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 CLEC4FQ8N1N0 589 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 GALNT6Q8NCL4 622 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 OR5AK3PQ8NH89 298 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 SFXN5Q8TD22 340 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 MR1Q95460 341 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 PELOQ9BRX2 385 aaKnown RBP21.56■■□□□ 1.04
CPSF4-204ENST00000436336 CORO2BQ9UQ03 480 aa21.56■■□□□ 1.04
CPSF4-204ENST00000436336 SYNDIG1LA6NDD5 238 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 VSTM2BA6NLU5 285 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 OR10H2O60403 315 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 IFI6P09912 130 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 NT5EP21589 574 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 SDHBP21912 280 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 CHI3L1P36222 383 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 STT3AP46977 705 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 CCT3P49368 545 aaKnown RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 LTB4RQ15722 352 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 NKG7Q16617 165 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 RSPO4Q2I0M5 234 aaPredicted RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 SPDYE7PQ495Y7 208 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 LCN10Q6JVE6 187 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 MRPL14Q6P1L8 145 aaKnown RBP21.55■■□□□ 1.04
CPSF4-204ENST00000436336 TMEM107Q6UX40 140 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 PLPP5Q8NEB5 264 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ZNF675Q8TD23 568 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 ELP4Q96EB1 424 aa21.55■■□□□ 1.04
CPSF4-204ENST00000436336 FAM120BQ96EK7 910 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms