RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TLN1Q9Y490 2541 aaKnown RBP14.48□□□□□ -0.09
TREX1-201ENST00000433541 SPTA1P02549 2419 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 COL6A6A6NMZ7 2263 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 A0A1W2PS29 197 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 SLC35E2P0CK97 266 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 CPMP14384 443 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 CSNK2A2P19784 350 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 CASRP41180 1078 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 ERVK-8P63133 956 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 IGLV3-21P80748 117 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 ZNF750Q32MQ0 723 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 XKR7Q5GH72 579 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 ACER2Q5QJU3 275 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 HSDL2Q6YN16 418 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 IKBIPQ70UQ0 350 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 PRICKLE2Q7Z3G6 844 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 GALNT12Q8IXK2 581 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 SAMD14Q8IZD0 417 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 LRRC25Q8N386 305 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 LIX1Q8N485 282 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 NFAM1Q8NET5 270 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 SUN3Q8TAQ9 357 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 ELP5Q8TE02 316 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 CDCP1Q9H5V8 836 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 ZBTB20Q9HC78 741 aaPredicted RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.47□□□□□ -0.09
TREX1-201ENST00000433541 SIRT5Q9NXA8 310 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 LUZP4Q9P127 313 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 ERVK-19Q9WJR5 959 aa14.47□□□□□ -0.09
TREX1-201ENST00000433541 EIF3LQ9Y262 564 aaKnown RBP14.47□□□□□ -0.09
TREX1-201ENST00000433541 TRPC5OSA6NMA1 111 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 SNNO75324 88 aaPredicted RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 ZFAND5O76080 213 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 JUNP05412 331 aaKnown RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 SDC1P18827 310 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 DDCP20711 480 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 NTSP30990 170 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 HPCAL1P37235 193 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 ASMTP46597 345 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 ST13P50502 369 aaKnown RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 OC90Q02509 493 aaPredicted RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 NXNQ6DKJ4 435 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 RNF111Q6ZNA4 994 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 DGAT2L6Q6ZPD8 337 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 SLC29A4Q7RTT9 530 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 RPS19BP1Q86WX3 136 aaKnown RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 TICAM1Q8IUC6 712 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 BEST3Q8N1M1 668 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 APCDD1LQ8NCL9 501 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 OR1N1Q8NGS0 311 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 PSMF1Q92530 271 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 SENP5Q96HI0 755 aaPredicted RBP14.46□□□□□ -0.09
TREX1-201ENST00000433541 EGLN2Q96KS0 407 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 GAL3ST4Q96RP7 486 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 LMF1Q96S06 567 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 SLAMF7Q9NQ25 335 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 PLA2G3Q9NZ20 509 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 BAIAP2L1Q9UHR4 511 aa14.46□□□□□ -0.09
TREX1-201ENST00000433541 GABRR3A8MPY1 467 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 NPIPB8E9PQR5 432 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 SLCO1B7G3V0H7 640 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 KLF11O14901 512 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 HDAC3O15379 428 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 VPS4BO75351 444 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 BCKDHAP12694 445 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 DDX5P17844 614 aaKnown RBP14.45□□□□□ -0.1
TREX1-201ENST00000433541 TACR1P25103 407 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 PTGER1P34995 402 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 HK2P52789 917 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 C19orf57Q0VDD7 668 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 KIAA0040Q15053 153 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 NADK2Q4G0N4 442 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 C6orf136Q5SQH8 315 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 IL23RQ5VWK5 629 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 FAM71E1Q6IPT2 247 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 CCDC116Q8IYX3 515 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 VWA5B2Q8N398 1253 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 ARFGAP2Q8N6H7 521 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 ZNF321PQ8N8H1 164 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 ADCY4Q8NFM4 1077 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 PPCDCQ96CD2 204 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 C11orf24Q96F05 449 aaPredicted RBP14.45□□□□□ -0.1
TREX1-201ENST00000433541 FBXL20Q96IG2 436 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 LIN28AQ9H9Z2 209 aaKnown RBP14.45□□□□□ -0.1
TREX1-201ENST00000433541 MED4Q9NPJ6 270 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 SLC35C2Q9NQQ7 365 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 ANKRD10Q9NXR5 420 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 NOP53Q9NZM5 478 aaKnown RBP14.45□□□□□ -0.1
TREX1-201ENST00000433541 EHD3Q9NZN3 535 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 SH3BP4Q9P0V3 963 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 BCAP29Q9UHQ4 241 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 HAO1Q9UJM8 370 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 ANAPC2Q9UJX6 822 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 CES1P1Q9UKY3 287 aa14.45□□□□□ -0.1
TREX1-201ENST00000433541 WBP11Q9Y2W2 641 aaKnown RBP14.45□□□□□ -0.1
TREX1-201ENST00000433541 GOLGA8QA0A0J9YX86 632 aa14.44□□□□□ -0.1
TREX1-201ENST00000433541 GOLGA8OA6NCC3 632 aa14.44□□□□□ -0.1
TREX1-201ENST00000433541 GOLGA8NF8WBI6 632 aa14.44□□□□□ -0.1
TREX1-201ENST00000433541 HRKO00198 91 aa14.44□□□□□ -0.1
TREX1-201ENST00000433541 DDAH2O95865 285 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms