RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PTRH1Q86Y79 214 aaKnown RBP17.14■□□□□ 0.33
HMGN1-206ENST00000431390 ZNF595Q8IYB9 648 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 LRRC25Q8N386 305 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-206ENST00000431390 TMEM52Q8NDY8 209 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 OR51Q1Q8NH59 317 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 OR10A6Q8NH74 314 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 PEX11GQ96HA9 241 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 SLC35A5Q9BS91 424 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 SEMA3GQ9NS98 782 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 SIRT3Q9NTG7 399 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-206ENST00000431390 DHCR7Q9UBM7 475 aaKnown RBP17.14■□□□□ 0.33
HMGN1-206ENST00000431390 NDOR1Q9UHB4 597 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 RAXQ9Y2V3 346 aa17.14■□□□□ 0.33
HMGN1-206ENST00000431390 TMEM184BQ9Y519 407 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-206ENST00000431390 FAM227AF5H4B4 570 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 MGRN1O60291 552 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 BCAS2O75934 225 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 GPR75O95800 540 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 HBQ1P09105 142 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 FGF5P12034 268 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 SOAT1P35610 550 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 FEN1P39748 380 aaKnown RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 XKP51811 444 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 MAT1AQ00266 395 aaKnown RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 MS4A2Q01362 244 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 FOLH1Q04609 750 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 DSG2Q14126 1118 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 FLOT2Q14254 428 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 PRAMEF17Q5VTA0 474 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 TMEM64Q6YI46 380 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 SERPINA11Q86U17 422 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 PPP1R3BQ86XI6 285 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 CALHM3Q86XJ0 350 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 CCDC116Q8IYX3 515 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 METTL27Q8N6F8 245 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 TNIP2Q8NFZ5 429 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 JADE3Q92613 823 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 FAM120BQ96EK7 910 aaKnown RBP17.13■□□□□ 0.33
HMGN1-206ENST00000431390 RAD21L1Q9H4I0 556 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 ZNF304Q9HCX3 659 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 OCIAD1Q9NX40 245 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 MAP4K5Q9Y4K4 846 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 PCDHB3Q9Y5E6 796 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 SCN2AQ99250 2005 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 CELSR3Q9NYQ7 3312 aa17.13■□□□□ 0.33
HMGN1-206ENST00000431390 EFCAB7A8K855 629 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 FAM220BPB1ANY3 271 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 TMX2-CTNND1H3BSU7 103 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 FGF17O60258 216 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 STAMBPO95630 424 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 KRT75O95678 551 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 C8orf89P0DMQ9 161 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 CPMP14384 443 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 PORP16435 677 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-206ENST00000431390 IL10P22301 178 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 GPC1P35052 558 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 CDK9P50750 372 aaKnown RBP17.12■□□□□ 0.33
HMGN1-206ENST00000431390 GZMMP51124 257 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 DUSP2Q05923 314 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 VAC14Q08AM6 782 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 RIPK1Q13546 671 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 IFNEQ86WN2 208 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 BMPERQ8N8U9 685 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 OR2T12Q8NG77 320 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 OR52N2Q8NGI0 321 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 SFXN5Q8TD22 340 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 MOAP1Q96BY2 351 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 TBC1D20Q96BZ9 403 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 OR1F2PQ96R84 312 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 SPATA9Q9BWV2 254 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 SLC7A5P2Q9GIP4 190 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 PCDHAC1Q9H158 963 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 EPS8L2Q9H6S3 715 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 AKAP7Q9P0M2 348 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-206ENST00000431390 GMPR2Q9P2T1 348 aaKnown RBP17.12■□□□□ 0.33
HMGN1-206ENST00000431390 SNX8Q9Y5X2 465 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 APC2O95996 2303 aa17.12■□□□□ 0.33
HMGN1-206ENST00000431390 NUP210LQ5VU65 1888 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 RNF103-CHMP3A0A140T963 221 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CLDN4O14493 209 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CTNSO60931 367 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SCRG1O75711 98 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 FHP07954 510 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 FBLP22087 321 aaKnown RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 CHI3L1P36222 383 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 MC2RQ01718 297 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 FADDQ13158 208 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SYT16Q17RD7 645 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SAXO2Q658L1 398 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 MARCH9Q86YJ5 346 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 SHISA5Q8N114 240 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 ANKRD9Q96BM1 317 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 NEURL3Q96EH8 262 aa17.11■□□□□ 0.33
HMGN1-206ENST00000431390 REXO5Q96IC2 774 aaKnown RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 BBC3Q96PG8 261 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-206ENST00000431390 FBXO8Q9NRD0 319 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms