RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TRAF4Q9BUZ4 470 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 GPR174Q9BXC1 333 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CAPS2Q9BXY5 557 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 RAB34Q9BZG1 259 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCSER1Q9C0I3 900 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 FAM107BQ9H098 131 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCDC68Q9H2F9 335 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TNMDQ9H2S6 317 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 VCX3BQ9H321 246 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 MMADHCQ9H3L0 296 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 ASB7Q9H672 318 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 NPAP1Q9NZP6 1156 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 XPO7Q9UIA9 1087 aaKnown RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TMEM131Q92545 1883 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.74
HMGB3P5-201ENST00000428894 CREBBPQ92793 2442 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ELOVL7A1L3X0 281 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 FRMD3A2A2Y4 597 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 A8MZ25 164 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 KPNA7A9QM74 516 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 MYO1GB0I1T2 1018 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 E9PQ18 207 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 LAD1O00515 517 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 OGTO15294 1046 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SLC16A4O15374 487 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 HUS1O60921 280 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 B3GALNT1O75752 331 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF189O75820 626 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 FGFR1OPO95684 399 aaKnown RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TBX18O95935 607 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 IVLP07476 585 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 OR52Z1P0C646 297 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SFTPCP11686 197 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CYP2F1P24903 491 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCT6AP40227 531 aaKnown RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 MAGEA11P43364 429 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 RANBP1P43487 201 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 NKX2-1P43699 371 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 LHX1P48742 406 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 LIG4P49917 911 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TPM4P67936 248 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 KDSRQ06136 332 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ORC2Q13416 577 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 LY6DQ14210 128 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TMEM132DQ14C87 1099 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TOMM20Q15388 145 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ALFQ53S48 1182 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TCTE1Q5JU00 501 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 DCAF10Q5QP82 559 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCDC122Q5T0U0 273 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 WSCD1Q658N2 575 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 RUFY3Q7L099 469 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SNX32Q86XE0 403 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 STKLD1Q8NE28 680 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SUN5Q8TC36 379 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 UCMAQ8WVF2 138 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CTNNBL1Q8WYA6 563 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 HSD17B8Q92506 261 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SIPA1Q96FS4 1042 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 C18orf12Q96KH6 178 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPATA17Q96L03 361 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CCDC114Q96M63 670 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF560Q96MR9 790 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SLC7A5P2Q9GIP4 190 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 POLD4Q9HCU8 107 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPHK2Q9NRA0 654 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 INTS9Q9NV88 658 aaKnown RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 DPP3Q9NY33 737 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 FLRT3Q9NZU0 649 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 LARSQ9P2J5 1176 aaKnown RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 WDR35Q9P2L0 1181 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 TBK1Q9UHD2 729 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 CPQQ9Y646 472 aa4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 COL5A1P20908 1838 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 SPTAN1Q13813 2472 aaKnown RBP4.2□□□□□ -1.74
HMGB3P5-201ENST00000428894 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 ZNF840PA6NDX5 716 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 H0YC42 278 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 YKT6O15498 198 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 OLFM2O95897 454 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 RPN1P04843 607 aaKnown RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 MBL2P11226 248 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 GP1BBP13224 206 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 FERP16591 822 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 CHMP24386 653 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 ARL3P36405 182 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 CSNK1EP49674 416 aaKnown RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 TPMTP51580 245 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 TPD52P55327 224 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 C21orf59P57076 290 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 ARPC4P59998 168 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 ERVPABLB-1P60509 514 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 SNRPEP62304 92 aaKnown RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 NOP14P78316 857 aaKnown RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 CDR2Q01850 454 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 LRRC23Q53EV4 343 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 XKR6Q5GH73 641 aa4.19□□□□□ -1.74
HMGB3P5-201ENST00000428894 HES3Q5TGS1 186 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms