RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 MPIP34949 423 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PCOLCEQ15113 449 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 TERF2Q15554 542 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PGS1Q32NB8 556 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 FAM174BQ3ZCQ3 159 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 CPZQ66K79 652 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PAPD4Q6PIY7 484 aaKnown RBP16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PAOXQ6QHF9 649 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 CIDECQ96AQ7 238 aaPredicted RBP16.4■□□□□ 0.22
LINC00271-201ENST00000421378 PPWD1Q96BP3 646 aaKnown RBP16.4■□□□□ 0.22
LINC00271-201ENST00000421378 COQ8BQ96D53 544 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 ZNF700Q9H0M5 742 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 ZNF385DQ9H6B1 395 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 MRGBPQ9NV56 204 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 FBXL4Q9UKA2 621 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 CLCA3PQ9Y6N3 262 aa16.4■□□□□ 0.22
LINC00271-201ENST00000421378 A8MUA0 341 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 MYO1GB0I1T2 1018 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 C17orf105B2RV13 164 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 C9JVG2 144 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 DYRK3O43781 588 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 TNNI3P19429 210 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 IL12AP29459 219 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 KIR3DL1P43629 444 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 NCBP2P52298 156 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 SRSF11Q05519 484 aaKnown RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 DUSP2Q05923 314 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 MPEG1Q2M385 716 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 SPANXN4Q5MJ08 99 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 GKAP1Q5VSY0 366 aaPredicted RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 NDUFAF7Q7L592 441 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 CCDC116Q8IYX3 515 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 NATD1Q8N6N6 113 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 OR8J2Q8NGG1 315 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 OR14A16Q8NHC5 309 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 SUN3Q8TAQ9 357 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 DAZLQ92904 295 aaKnown RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 RIT1Q92963 219 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 ZBED6CLQ96FA7 236 aaPredicted RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 WDR77Q9BQA1 342 aaPredicted RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 TUBB6Q9BUF5 446 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 DUSP26Q9BV47 211 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
LINC00271-201ENST00000421378 CPNE5Q9HCH3 593 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 POLHQ9Y253 713 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 PCSK5Q92824 1860 aa16.39■□□□□ 0.21
LINC00271-201ENST00000421378 SAGE2PA6NJ88 616 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 K7ENP7 123 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 HPP00738 406 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 NT5EP21589 574 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 GALNSP34059 522 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 C6orf163Q5TEZ5 329 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 INO80CQ6PI98 192 aaPredicted RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 GALNT12Q8IXK2 581 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 PTPMT1Q8WUK0 201 aaPredicted RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 AMDHD1Q96NU7 426 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 SLAMF7Q9NQ25 335 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 CCDC167Q9P0B6 97 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 MAN2B2Q9Y2E5 1009 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 PGRP06401 933 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 S100A3P33764 101 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 FRKP42685 505 aaPredicted RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 PGDP52209 483 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 POLR2JP52435 117 aaKnown RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 VAC14Q08AM6 782 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 RCAN2Q14206 197 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 SPRED3Q2MJR0 410 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 DCAF10Q5QP82 559 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 OR4F3Q6IEY1 312 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 DGAT2L6Q6ZPD8 337 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 CPSF7Q8N684 471 aaKnown RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 OR9A2Q8NGT5 310 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ZFP28Q8NHY6 868 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 FER1L6-AS2Q96M78 137 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 NMUR2Q9GZQ4 415 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 GLIPR2Q9H4G4 154 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 CXorf21Q9HAI6 301 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ZNF160Q9HCG1 818 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 SAR1AQ9NR31 198 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ACSS1Q9NUB1 689 aaPredicted RBP16.38■□□□□ 0.21
LINC00271-201ENST00000421378 TMEM45AQ9NWC5 275 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ZMIZ1Q9ULJ6 1067 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ARL2BPQ9Y2Y0 163 aa16.38■□□□□ 0.21
LINC00271-201ENST00000421378 ACACBO00763 2458 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 FAM234BA2RU67 622 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 CCDC22O60826 627 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 IL6P05231 212 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 EFNA1P20827 205 aaPredicted RBP16.37■□□□□ 0.21
LINC00271-201ENST00000421378 PTGER1P34995 402 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 RRADP55042 308 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 MANFP55145 182 aaKnown RBP16.37■□□□□ 0.21
LINC00271-201ENST00000421378 SLC26A5P58743 744 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 HSPB3Q12988 150 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 UBAP2LQ14157 1087 aaKnown RBP16.37■□□□□ 0.21
LINC00271-201ENST00000421378 LTB4RQ15722 352 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 EXT1Q16394 746 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 PRICKLE4Q2TBC4 344 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 BTBD16Q32M84 506 aa16.37■□□□□ 0.21
LINC00271-201ENST00000421378 VWA5B2Q8N398 1253 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms