RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ST13P4Q8IZP2 240 aaPredicted RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR52N2Q8NGI0 321 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 UCN3Q969E3 161 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 FKBP10Q96AY3 582 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CTHRC1Q96CG8 243 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 DEPDC7Q96QD5 511 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 BBS4Q96RK4 519 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CHST8Q9H2A9 424 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 LANCL2Q9NS86 450 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ADA2Q9NZK5 511 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 POMPQ9Y244 141 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 MSRB2Q9Y3D2 182 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CACNA1BQ00975 2339 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 IGKV3D-11A0A0A0MRZ8 115 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF860A6NHJ4 632 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 VSTM2BA6NLU5 285 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 WASHC1A8K0Z3 465 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 FGF17O60258 216 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 PLOD3O60568 738 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 MT-CO3P00414 261 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 NCBP2P52298 156 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 OLR1P78380 273 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 DCDP81605 110 aaKnown RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 LIPEQ05469 1076 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 GAB1Q13480 694 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 RGNQ15493 299 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 RABL3Q5HYI8 236 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ERICH5Q6P6B1 374 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 HPS6Q86YV9 775 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR2L13Q8N349 312 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ADAMTS14Q8WXS8 1223 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 JADE3Q92613 823 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ELP4Q96EB1 424 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 REXO5Q96IC2 774 aaKnown RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CLPTM1LQ96KA5 538 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ASPSCR1Q9BZE9 553 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 IKZF5Q9H5V7 419 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMEM38AQ9H6F2 299 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 SYNDIG1Q9H7V2 258 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CXorf36Q9H7Y0 433 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 GIN1Q9NXP7 522 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ACTR3BQ9P1U1 418 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 C5AR2Q9P296 337 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 DHCR7Q9UBM7 475 aaKnown RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF451Q9Y4E5 1061 aa13.39□□□□□ -0.27
SHMT1P1-201ENST00000419974 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 GLOD5A6NK44 160 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 MGRN1O60291 552 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ERAL1O75616 437 aaKnown RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 CIB2O75838 187 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 PSMG1O95456 288 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 CPSF4O95639 269 aaKnown RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 CD63P08962 238 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 FBLP22087 321 aaKnown RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ALAS2P22557 587 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 XCR1P46094 333 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 GSK3BP49841 420 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 MTPNP58546 118 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ELF3P78545 371 aaPredicted RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 RBBP4Q09028 425 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAP4K2Q12851 820 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 VEZF1Q14119 521 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ST3GAL2Q16842 350 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 GTDC1Q4AE62 458 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF628Q5EBL2 1059 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 C6orf163Q5TEZ5 329 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 IRAK1BP1Q5VVH5 260 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 AP1ARQ63HQ0 302 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 COX15Q7KZN9 410 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 OVCH1Q7RTY7 1134 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF551Q7Z340 670 aaPredicted RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 PROSER1Q86XN7 944 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 CCDC116Q8IYX3 515 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC38A9Q8NBW4 561 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR56A1Q8NGH5 318 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 HOXB13Q92826 284 aaPredicted RBP13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 GATA6Q92908 595 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 TAAR9Q96RI9 348 aa13.38□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms