RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 RAB14P61106 215 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARF3P61204 181 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARF1P84077 181 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PLIN5Q00G26 463 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OTUD4Q01804 1114 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GNA12Q03113 381 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ENPEPQ07075 957 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OVGP1Q12889 678 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GAGE5Q13069 117 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GAGE6Q13070 117 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PPIL2Q13356 520 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ORC2Q13416 577 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLC39A6Q13433 755 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GTF2H2Q13888 395 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FLOT2Q14254 428 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ZNF234Q14588 700 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PDK1Q15118 436 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ALX1Q15699 326 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 UGP2Q16851 508 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DGUOKQ16854 277 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 YIF1BQ5BJH7 314 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FGD3Q5JSP0 725 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 BRMS1LQ5PSV4 323 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GRTP1Q5TC63 336 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GARNL3Q5VVW2 1013 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 UBE2UQ5VVX9 321 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 AGAP6Q5VW22 663 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ACSM2BQ68CK6 577 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 HIST2H2BDQ6DRA6 164 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GTF2H2CQ6P1K8 395 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DCUN1D2Q6PH85 259 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PAPD4Q6PIY7 484 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ZNF773Q6PK81 442 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARSKQ6UWY0 536 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ABRAXAS1Q6UWZ7 409 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM26Q6ZUK4 368 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 HIST3H2AQ7L7L0 130 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARCQ7LC44 396 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRMT1LQ7Z2T5 733 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PXKQ7Z7A4 578 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CATSPER3Q86XQ3 398 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLC13A5Q86YT5 568 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PLCZ1Q86YW0 608 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 WDR49Q8IV35 697 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NUDCD3Q8IVD9 361 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MICU2Q8IYU8 434 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FAM9CQ8IZT9 166 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 C4orf33Q8N1A6 199 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 BEST3Q8N1M1 668 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ZNF786Q8N393 782 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCNYL1Q8N7R7 359 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FNDC5Q8NAU1 212 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 APPL2Q8NEU8 664 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RDM1Q8NG50 284 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR13A1Q8NGR1 328 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR1J2Q8NGS2 313 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CDC26Q8NHZ8 85 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 VANGL1Q8TAA9 524 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DUSP19Q8WTR2 217 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PDCD6IPQ8WUM4 868 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SLC20A1Q8WUM9 679 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 KCTD4Q8WVF5 259 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NCLNQ969V3 563 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMIGD2Q96BF3 282 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCDC124Q96CT7 223 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 LRRC39Q96DD0 335 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARL5BQ96KC2 179 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ART5Q96L15 291 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 RILPQ96NA2 401 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DACH2Q96NX9 599 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 AGAP4Q96P64 663 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 APOL4Q9BPW4 351 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TRIM9Q9C026 710 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MTMR12Q9C0I1 747 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM39BQ9GZU3 492 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 GANQ9H2C0 597 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 TMEM245Q9H330 911 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 MUC13Q9H3R2 512 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NARFLQ9H6Q4 476 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 DHX33Q9H6R0 707 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 SEBOXQ9HB31 216 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 LY9Q9HBG7 655 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 KLHL1Q9NR64 748 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FBXO8Q9NRD0 319 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 FAM118AQ9NWS6 357 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 PAQR5Q9NXK6 330 aaPredicted RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 IL37Q9NZH6 218 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 CCDC59Q9P031 241 aaKnown RBP3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ACTR3BQ9P1U1 418 aa3.16□□□□□ -1.9
SDCBPP3-201ENST00000419629 ARMCX1Q9P291 453 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms