RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CMTM7Q96FZ5 175 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PRAP1Q96NZ9 151 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MCHR1Q99705 422 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 GTPBP2Q9BX10 602 aaKnown RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
SCN1B-202ENST00000415950 FKBP14Q9NWM8 211 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 HSFX1Q9UBD0 423 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 WDR45Q9Y484 360 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 PCDHA9Q9Y5H5 950 aa12.35□□□□□ -0.43
SCN1B-202ENST00000415950 KDELR3O43731 214 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 HPRP00739 348 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 TACSTD2P09758 323 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 PYCR1P32322 319 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 CLDN8P56748 225 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 AMZ1Q400G9 498 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ABCA11PQ4W5N1 156 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 STEAP3Q658P3 488 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF551Q7Z340 670 aaPredicted RBP12.34□□□□□ -0.43
SCN1B-202ENST00000415950 CCDC116Q8IYX3 515 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 OR6Q1Q8NGQ2 317 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF350Q9GZX5 532 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ACOT13Q9NPJ3 140 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 COCHO43405 550 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 B4GALT2O60909 372 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 OR7A10O76100 309 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 DRD5P21918 477 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ACVR1BP36896 505 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ERVK-21P61565 698 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF181Q2M3W8 571 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 CEP68Q76N32 757 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 SORCS1Q8WY21 1168 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 BTBD1Q9H0C5 482 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 C2orf78A6NCI8 922 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF701M0R085 212 aaPredicted RBP12.34□□□□□ -0.43
SCN1B-202ENST00000415950 FMO6PO60774 539 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 GRIK2Q13002 908 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ENPP7Q6UWV6 458 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 TBL1XR1Q9BZK7 514 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 PCBD2Q9H0N5 130 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 PPIL3Q9H2H8 161 aaKnown RBP12.34□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 MAB21L2Q9Y586 359 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 CLCA1A8K7I4 914 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 FZD9O00144 591 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 FLRT2O43155 660 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 SBK3P0C264 359 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 ZNF20P17024 532 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 GTF2IRD2BQ6EKJ0 949 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 GTF2IRD2Q86UP8 949 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 GALNT11Q8NCW6 608 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 NUS1Q96E22 293 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 CLCC1Q96S66 551 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 SLC38A3Q99624 504 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 MTG2Q9H4K7 406 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 HCN3Q9P1Z3 774 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
SCN1B-202ENST00000415950 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 AGAP5A6NIR3 686 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 TSPAN6O43657 245 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PLATP00750 562 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 RPS17P08708 135 aaKnown RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 SLC10A3P09131 477 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PCSK2P16519 638 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 NAA10P41227 235 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PGFP49763 221 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ENPP2Q13822 863 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 XKRXQ6PP77 449 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 TPRG1Q6ZUI0 275 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 SAMD14Q8IZD0 417 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PARP16Q8N5Y8 322 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 OR52E4Q8NGH9 312 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 OR5M3Q8NGP4 307 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 SCRN2Q96FV2 425 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PNO1Q9NRX1 252 aaKnown RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PARPBPQ9NWS1 579 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 SLC39A1Q9NY26 324 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 YIPF1Q9Y548 306 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 CXCR1P25024 350 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ETV3P41162 512 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PIK3CBP42338 1070 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PIN1Q13526 163 aaPredicted RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 EFR3AQ14156 821 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 PYHIN1Q6K0P9 492 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 ITPKCQ96DU7 683 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 S100A16Q96FQ6 103 aaKnown RBP12.33□□□□□ -0.44
SCN1B-202ENST00000415950 CENPOQ9BU64 300 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 WDR26Q9H7D7 661 aa12.33□□□□□ -0.44
SCN1B-202ENST00000415950 NDRG2Q9UN36 371 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms