RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SH3BP5O60239 455 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 EIF2S1P05198 315 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CDH3P22223 829 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CPN2P22792 545 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 AQP1P29972 269 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ARSFP54793 590 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 SNRPNP63162 240 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 SELENOWP63302 87 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 MERTKQ12866 999 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 DAG1Q14118 895 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 DEFB133Q30KQ1 61 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 DEFB134Q4QY38 66 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CRB2Q5IJ48 1285 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ZC3H7AQ8IWR0 971 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CEP76Q8TAP6 659 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 MAGEE2Q8TD90 523 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 FAM122AQ96E09 287 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 C10orf90Q96M02 699 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF681Q96N22 645 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ADI1Q9BV57 179 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 DAPP1Q9UN19 280 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 SLC22A7Q9Y694 548 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ZNF780BQ9Y6R6 833 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 KHNYNO15037 678 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 DPM1O60762 260 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 GNSP15586 552 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 TLX1P31314 330 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 MPIP34949 423 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 RXRGP48443 463 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 LIM2P55344 173 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 KCNJ10P78508 379 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 TP53BP2Q13625 1128 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 RUNX2Q13950 521 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 C14orf28Q4W4Y0 310 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ZC3H12BQ5HYM0 836 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 OTUD3Q5T2D3 398 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 OR2T5Q6IEZ7 315 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 OR52E8Q6IFG1 317 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 REEP3Q6NUK4 255 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 TNFAIP8L2Q6P589 184 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 BHLHB9Q6PI77 547 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 PATL1Q86TB9 770 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 STK32CQ86UX6 486 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CCDC116Q8IYX3 515 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 OR2T29Q8NH02 315 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 TAMM41Q96BW9 452 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 TPD52L3Q96J77 140 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 SLC35G5Q96KT7 338 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 CCDC3Q9BQI4 270 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 EDEM2Q9BV94 578 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ERVMER34-1Q9H9K5 563 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ZCCHC3Q9NUD5 404 aaKnown RBP13.28□□□□□ -0.28
LIMS2-206ENST00000409754 USE1Q9NZ43 259 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 BAG5Q9UL15 447 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 ABCG2Q9UNQ0 655 aa13.28□□□□□ -0.28
LIMS2-206ENST00000409754 M0QX08 132 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 ALPLP05186 524 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 FEN1P39748 380 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 DCTP40126 519 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 IST1P53990 364 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 EPHA4P54764 986 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 VSX2P58304 361 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 RPS26P62854 115 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 VLDLRP98155 873 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 DUSP2Q05923 314 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 HLA-BQ31612 363 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 SLC36A3Q495N2 470 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 IQCCQ4KMZ1 466 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 SHQ1Q6PI26 577 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 KANSL1Q7Z3B3 1105 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 HIPK1Q86Z02 1210 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 METTL25Q8N6Q8 603 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 OR56A1Q8NGH5 318 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 C7orf34Q96L11 122 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 RDH12Q96NR8 316 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 RBM4BQ9BQ04 359 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 RBM4Q9BWF3 364 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 FAM60AQ9NP50 221 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 UCKL1Q9NWZ5 548 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 IFT80Q9P2H3 777 aaPredicted RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 PDP2Q9P2J9 529 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 PADI2Q9Y2J8 665 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.29
LIMS2-206ENST00000409754 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
LIMS2-206ENST00000409754 SLC9B1P1A6NJY1 282 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 C5orf58C9J3I9 102 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 hCG_2039718K7EN88 272 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 HMGN4O00479 90 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 SRPX2O60687 465 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-206ENST00000409754 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-206ENST00000409754 SDC3O75056 442 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 E2F6O75461 281 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 FHP07954 510 aa13.26□□□□□ -0.29
LIMS2-206ENST00000409754 TFPTP0C1Z6 253 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms