RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 ID2Q02363 134 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 RASA2Q15283 850 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 HIST2H2BCQ6DN03 193 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 RNF111Q6ZNA4 994 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 TAGAPQ8N103 731 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 RNF175Q8N4F7 328 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 OR2M7Q8NG81 312 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 OR4F6Q8NGB9 312 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 FAM57AQ8TBR7 257 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 MTFMTQ96DP5 389 aaKnown RBP13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 CCDC126Q96EE4 140 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 CDK15Q96Q40 435 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 TSPAN10Q9H1Z9 355 aaPredicted RBP13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 SEMA4BQ9NPR2 832 aaPredicted RBP13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 NOTCH2Q04721 2471 aa13.45□□□□□ -0.26
NIF3L1-205ENST00000409588 C1orf226A1L170 272 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 A8MT66 165 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 HS6ST1O60243 411 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 KLK1P06870 262 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ATP5F1P24539 256 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 SLC37A1P57057 533 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 PLGLB1Q02325 96 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 CLCQ05315 142 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ASPHQ12797 758 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 SLC29A2Q14542 456 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF267Q14586 743 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF791Q3KP31 576 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 CMPK2Q5EBM0 449 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 TBCELQ5QJ74 424 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 C6orf163Q5TEZ5 329 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF787Q6DD87 383 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 TICAM1Q8IUC6 712 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 CHERPQ8IWX8 916 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF321PQ8N8H1 164 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 GBP7Q8N8V2 638 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 C17orf47Q8NEP4 570 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 OR7G1Q8NGA0 311 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 AGAP11Q8TF27 550 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 SELENOMQ8WWX9 145 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 TP63Q9H3D4 680 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 LIN28AQ9H9Z2 209 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 CXorf21Q9HAI6 301 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 VPS29Q9UBQ0 182 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 CFL2Q9Y281 166 aa13.44□□□□□ -0.26
NIF3L1-205ENST00000409588 ITPR2Q14571 2701 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 MYOCOSA0A1B0GUC4 107 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 ANKRD33BA6NCL7 494 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SUSD5O60279 629 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 ULK1O75385 1050 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SUPT7LO94864 414 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 GLSO94925 669 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 CLDN14O95500 239 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 AIFM1O95831 613 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 HOXD4P09016 255 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SBK3P0C264 359 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 FBXO45P0C2W1 286 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 PORP16435 677 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 HTR1EP28566 365 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 GCAP28676 217 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 PTGER4P35408 488 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 XKP51811 444 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 MAPK12P53778 367 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 GPR85P60893 370 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 FUT7Q11130 342 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SLC10A1Q14973 349 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF750Q32MQ0 723 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF678Q5SXM1 525 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 HLA-DQA1Q5Y7H0 255 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 C16orf47Q6ZP98 133 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 C9orf40Q8IXQ3 194 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SAMD14Q8IZD0 417 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 PAQR8Q8TEZ7 354 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SPACA9Q96E40 222 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF382Q96SR6 550 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SECISBP2Q96T21 854 aaKnown RBP13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 CNPPD1Q9BV87 410 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 FAIM2Q9BWQ8 316 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 TTTY12Q9BZ98 90 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SHCBP1LQ9BZQ2 653 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SH2D2AQ9NP31 389 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 DEPPQ9NTK1 212 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 QPCTLQ9NXS2 382 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 TMEM216Q9P0N5 145 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms