RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ACCSQ96QU6 501 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 OPRPNQ99935 248 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 FGFBP2Q9BYJ0 223 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 RAB17Q9H0T7 212 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 NDE1Q9NXR1 346 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 VPS54Q9P1Q0 977 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 MDFICQ9P1T7 246 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 ENTPD4Q9Y227 616 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 MTF2Q9Y483 593 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 RNF215Q9Y6U7 377 aa3.22□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZMYM6O95789 1325 aa3.21□□□□□ -1.89
HMGB1P17-201ENST00000403495 SALL1Q9NSC2 1324 aa3.21□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRGV8A0A0C4DH27 118 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ARHGEF33A8MVX0 844 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 H3BMH7 237 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 K7EQG2 157 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 SOCS3O14543 225 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 RASGRF2O14827 1237 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ARHGEF9O43307 516 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 HIST1H2AGP0C0S8 130 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR9G9P0C7N8 305 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 OXTRP30559 389 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZFP36L2P47974 494 aaKnown RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF131P52739 623 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ERVK-16P61578 105 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 MYBPC1Q00872 1141 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 GABPB1Q06547 395 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 FUT7Q11130 342 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 NFATC2Q13469 925 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ENPP2Q13822 863 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF146Q15072 292 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZC2HC1BQ5TFG8 222 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 RAET1GQ6H3X3 334 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ADAM5Q6NVV9 412 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 IRGCQ6NXR0 463 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 UNC5DQ6UXZ4 953 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 RBM43Q6ZSC3 357 aaKnown RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 BHLHA9Q7RTU4 235 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 AMZ2Q86W34 360 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 CARM1Q86X55 608 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZFAND4Q86XD8 727 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 CCDC71Q8IV32 467 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR1K1Q8NGR3 316 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 PCNPQ8WW12 178 aaKnown RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 HIST1H2ACQ93077 130 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 C11orf52Q96A22 123 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 CBWD1Q9BRT8 395 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 CCDC28BQ9BUN5 200 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 PARLQ9H300 379 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ACTR8Q9H981 624 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 LIN28AQ9H9Z2 209 aaKnown RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ROPN1Q9HAT0 212 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 NMUR1Q9HB89 426 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ADGRL4Q9HBW9 690 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 YAE1D1Q9NRH1 226 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 DEPPQ9NTK1 212 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 EIF3KQ9UBQ5 218 aaKnown RBP3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 LHX3Q9UBR4 397 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 MIOXQ9UGB7 285 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 FBXO7Q9Y3I1 522 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF175Q9Y473 711 aa3.21□□□□□ -1.9
HMGB1P17-201ENST00000403495 FAM205AQ6ZU69 1335 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 IGHV4-30-2A0A087WSY4 118 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 TEX48A0A1B0GUV7 120 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 KPNA7A9QM74 516 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 CHEK1O14757 476 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 SORBS2O94875 1100 aaKnown RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 HPRP00739 348 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 OAS1P00973 400 aaKnown RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 SERPINF2P08697 491 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 IL10P22301 178 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 UGT1A4P22310 534 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 TMOD1P28289 359 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 HPDP32754 393 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 RPL9P32969 192 aaKnown RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 CRYBA2P53672 197 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 SSTP61278 116 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 SIX1Q15475 284 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 MRGPRG-AS1Q2M3A8 158 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 C2CD6Q53TS8 623 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 WDR25Q64LD2 544 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 CDHR3Q6ZTQ4 885 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 ASRGL1Q7L266 308 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 PRSS48Q7RTY5 328 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 FAM131BQ86XD5 332 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 BANPQ8N9N5 519 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 MINDY2Q8NBR6 621 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 ICA1LQ8NDH6 482 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 ANKRD20A12PQ8NF67 263 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 GOLGA5Q8TBA6 731 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 SELENOMQ8WWX9 145 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 TMEM37Q8WXS4 190 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 MCHR2Q969V1 340 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF597Q96LX8 424 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 KCNK16Q96T55 309 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 LGMNQ99538 433 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 DCTN5Q9BTE1 182 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms