RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TMEM52Q8NDY8 209 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF675Q8TD23 568 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 ELP4Q96EB1 424 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TRIM15Q9C019 465 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TGIF2Q9GZN2 237 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PCDHAC1Q9H158 963 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TMEM38AQ9H6F2 299 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 C3orf14Q9HBI5 128 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 THUMPD1Q9NXG2 353 aaKnown RBP12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PTGFRNQ9P2B2 879 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 DMDP11532 3685 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 RNF103-CHMP3A0A140T963 221 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 EMC8O43402 210 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 FGF17O60258 216 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PLOD3O60568 738 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TNFRSF21O75509 655 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 DKK1O94907 266 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 GGT1P19440 569 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 GPC1P35052 558 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 MSX2P35548 267 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-209ENST00000397036 MAPK10P53779 464 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 OR4D2P58180 307 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PRR5P85299 388 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 RHDQ02161 417 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 DUSP2Q05923 314 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 MAP4K2Q12851 820 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 HSPB3Q12988 150 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 SERTAD2Q14140 314 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 ADRM1Q16186 407 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PWWP2BQ6NUJ5 590 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 C6orf120Q7Z4R8 191 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 FAM156AQ8NDB6 213 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 OR56A1Q8NGH5 318 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PEX11GQ96HA9 241 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TRIM8Q9BZR9 551 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 STRADBQ9C0K7 418 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 MKKSQ9NPJ1 570 aaPredicted RBP12.78□□□□□ -0.36
MCF2L-209ENST00000397036 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 HCN3Q9P1Z3 774 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 DHCR7Q9UBM7 475 aaKnown RBP12.78□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF451Q9Y4E5 1061 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 CLDN16Q9Y5I7 305 aa12.78□□□□□ -0.36
MCF2L-209ENST00000397036 TCRBV3S1A0A5B6 114 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 EFCAB7A8K855 629 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ARPC2O15144 300 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 POLR1CO15160 346 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 GMNNO75496 209 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 SOX30O94993 753 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 NTRK1P04629 796 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 C8BP07358 591 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 C8orf89P0DMQ9 161 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 UMPSP11172 480 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 CHI3L1P36222 383 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 XCR1P46094 333 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ANXA11P50995 505 aaKnown RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 INSM1Q01101 510 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 VMACQ2NL98 169 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF750Q32MQ0 723 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF385CQ66K41 422 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 GLYATQ6IB77 296 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 QSOX2Q6ZRP7 698 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 IFNEQ86WN2 208 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 PTOV1Q86YD1 416 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ST13P4Q8IZP2 240 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 OR2L13Q8N349 312 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 DTWD1Q8N5C7 304 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 METTL25Q8N6Q8 603 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 LIN37Q96GY3 246 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 ZPBPQ9BS86 351 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 PRTFDC1Q9NRG1 225 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 LANCL2Q9NS86 450 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 TOR4AQ9NXH8 423 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 GMPR2Q9P2T1 348 aaKnown RBP12.77□□□□□ -0.37
MCF2L-209ENST00000397036 NDOR1Q9UHB4 597 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 SNX8Q9Y5X2 465 aa12.77□□□□□ -0.37
MCF2L-209ENST00000397036 WDR87Q6ZQQ6 2873 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 B4GALT2O60909 372 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 LDB3O75112 727 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 SCRG1O75711 98 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ALBP02768 609 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 CYC1P08574 325 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 FBLP22087 321 aaKnown RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 OR1D4P47884 311 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 MAT1AQ00266 395 aaKnown RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 EIF3IQ13347 325 aaKnown RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
MCF2L-209ENST00000397036 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ISXQ2M1V0 245 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 SPDYE7PQ495Y7 208 aa12.76□□□□□ -0.37
MCF2L-209ENST00000397036 ZNF628Q5EBL2 1059 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms