RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 FIG4Q92562 907 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 RSC1A1Q92681 617 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 SLCO4A1Q96BD0 722 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 MS4A6EQ96DS6 147 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 RDH12Q96NR8 316 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 SH3GL1Q99961 368 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 CPPED1Q9BRF8 314 aaPredicted RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 DUSP15Q9H1R2 295 aaPredicted RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 KAT8Q9H7Z6 458 aaKnown RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 LIN28AQ9H9Z2 209 aaKnown RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 AGPAT4Q9NRZ5 378 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 FAM120CQ9NX05 1096 aaKnown RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 TEX10Q9NXF1 929 aaPredicted RBP6.58□□□□□ -1.36
RTN4-205ENST00000394609 ATP6V1HQ9UI12 483 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 CDC14AQ9UNH5 594 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 IFT52Q9Y366 437 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 SNX13Q9Y5W8 968 aa6.58□□□□□ -1.36
RTN4-205ENST00000394609 BDP1A6H8Y1 2624 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 LOC105369274A0A096LPK9 316 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 LOC102723532A0A0G2JNH3 316 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 MYOCOSA0A1B0GUC4 107 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 OR2A25A4D2G3 310 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GLOD5A6NK44 160 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SAC3D1A6NKF1 404 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 FAM47E-STBD1D6RA91 191 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 CLIC1O00299 241 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DLGAP1O14490 977 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 RGS13O14921 159 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GSTA4O15217 222 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SH3BP5O60239 455 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 TPST1O60507 370 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 PRKRAO75569 313 aaKnown RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 UMPSP11172 480 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DDCP20711 480 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 IL10P22301 178 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 FASP25445 335 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GSSP48637 474 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 TRPC1P48995 793 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DHPSP49366 369 aaPredicted RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 PPM1FP49593 454 aaPredicted RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 HBA1P69905 142 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 OCA2Q04671 838 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SLAMF1Q13291 335 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GAB1Q13480 694 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 PDE7AQ13946 482 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ATP6AP1Q15904 470 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SWI5Q1ZZU3 235 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 TMEM35AQ53FP2 167 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 MTX3Q5HYI7 312 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 FGD3Q5JSP0 725 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 WDR45BQ5MNZ6 344 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ANXA8L1Q5VT79 327 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GLYATQ6IB77 296 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 FRMPD2BQ6IN97 320 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 LCN8Q6JVE9 175 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ABHD17CQ6PCB6 329 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SPESP1Q6UW49 350 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 MSANTD1Q6ZTZ1 278 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ZNF551Q7Z340 670 aaPredicted RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 CAMKMTQ7Z624 323 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 NUDT13Q86X67 352 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 GKN2Q86XP6 184 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 PTRH1Q86Y79 214 aaKnown RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 LACC1Q8IV20 430 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 OR4N4Q8N0Y3 316 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ZNF786Q8N393 782 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ACOT4Q8N9L9 421 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 PAPD5Q8NDF8 572 aaKnown RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 PIK3C3Q8NEB9 887 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DNAJB8Q8NHS0 232 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 LRTOMTQ8WZ04 291 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 TANKQ92844 425 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 FAM120BQ96EK7 910 aaKnown RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 CCDC115Q96NT0 180 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 QRFPRQ96P65 431 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 OR2A5Q96R48 311 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SLC29A1Q99808 456 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 CIB1Q99828 191 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DPH2Q9BQC3 489 aaPredicted RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 BHLHE41Q9C0J9 482 aaPredicted RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 SEMA6AQ9H2E6 1030 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 DDX31Q9H8H2 851 aaKnown RBP6.57□□□□□ -1.36
RTN4-205ENST00000394609 POLR1BQ9H9Y6 1135 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 TMEM74BQ9NUR3 256 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 KLHL3Q9UH77 587 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 ZNF639Q9UID6 485 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 SPAG17Q6Q759 2223 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 WDR87Q6ZQQ6 2873 aa6.57□□□□□ -1.36
RTN4-205ENST00000394609 VPS13AQ96RL7 3174 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 NCOR1O75376 2440 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SPEGQ15772 3267 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A0A6YYD5 115 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A1W2PPW3 197 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A1W2PRB8 838 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 DHRS12A0PJE2 317 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ELOVL7A1L3X0 281 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ISPDA4D126 451 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 OR5K3A6NET4 321 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CENPBD1B2RD01 187 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms