RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 TMED9Q9BVK6 235 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 BHLHE41Q9C0J9 482 aaPredicted RBP17.1■□□□□ 0.33
ERCC2-201ENST00000391941 TBC1D17Q9HA65 648 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 GULP1Q9UBP9 304 aa17.1■□□□□ 0.33
ERCC2-201ENST00000391941 SCO1O75880 301 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 GSTM1P09488 218 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 RHCEP18577 417 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 AVPR1BP47901 424 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 ZNF33BQ06732 778 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 FCHO2Q0JRZ9 810 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 SYPL1Q16563 259 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 CFAP206Q8IYR0 622 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
ERCC2-201ENST00000391941 KATNB1Q9BVA0 655 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 NDUFB11Q9NX14 153 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 TMCC3Q9ULS5 477 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 NUMA1Q14980 2115 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 C12orf71A8MTZ7 269 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 C5orf58C9J3I9 102 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 MPZL2O60487 215 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 GPR37L1O60883 481 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 OSMP13725 252 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 HSD3B1P14060 373 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 NPPBP16860 134 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 HSD3B2P26439 372 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 EVI2BP34910 448 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 CTBP2P56545 445 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 PCBP3P57721 371 aaKnown RBP17.09■□□□□ 0.33
ERCC2-201ENST00000391941 SNRPD1P62314 119 aaKnown RBP17.09■□□□□ 0.33
ERCC2-201ENST00000391941 FABP5Q01469 135 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 HEPACAMQ14CZ8 416 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 CRB2Q5IJ48 1285 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 DCST1Q5T197 706 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 TMEM220Q6QAJ8 160 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 IL20RBQ6UXL0 311 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 Q6ZNB5 142 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 SLC30A8Q8IWU4 369 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 BMPERQ8N8U9 685 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 OR5H6Q8NGV6 325 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 SLC9A6Q92581 669 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 KLK6Q92876 244 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 EXOSC8Q96B26 276 aaKnown RBP17.09■□□□□ 0.33
ERCC2-201ENST00000391941 UPRTQ96BW1 309 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 REPS1Q96D71 796 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 ECHDC3Q96DC8 303 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 ART5Q96L15 291 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 TMEM38AQ9H6F2 299 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 ANKRA2Q9H9E1 313 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 RRAGCQ9HB90 399 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 MCUBQ9NWR8 336 aa17.09■□□□□ 0.33
ERCC2-201ENST00000391941 PIPSLA2A3N6 862 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 ZSCAN5BA6NJL1 495 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 GLOD5A6NK44 160 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 CENPBD1B2RD01 187 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 K7ESM1 405 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 YES1P07947 543 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 GSTM5P46439 218 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 RHAGQ02094 409 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 SLC35F1Q5T1Q4 408 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.33
ERCC2-201ENST00000391941 TMEM25Q86YD3 366 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 TMC8Q8IU68 726 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 GHDCQ8N2G8 530 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 VWA5B2Q8N398 1253 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 OXR1Q8N573 874 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 GOT1L1Q8NHS2 421 aaPredicted RBP17.08■□□□□ 0.33
ERCC2-201ENST00000391941 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.08■□□□□ 0.33
ERCC2-201ENST00000391941 MRPS31Q92665 395 aaKnown RBP17.08■□□□□ 0.33
ERCC2-201ENST00000391941 MND1Q9BWT6 205 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 SEC14L4Q9UDX3 406 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 ATP6V1HQ9UI12 483 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 KCNE2Q9Y6J6 123 aa17.08■□□□□ 0.33
ERCC2-201ENST00000391941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
ERCC2-201ENST00000391941 A0A1W2PRU2 124 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 KCNC3Q14003 757 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 GRIN2CQ14957 1233 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 RNASE12Q5GAN4 147 aaKnown RBP17.08■□□□□ 0.32
ERCC2-201ENST00000391941 CNIH2Q6PI25 160 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 GAREM2Q75VX8 874 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 TIGD4Q8IY51 512 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 SDR16C5Q8N3Y7 309 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 MACROD1Q9BQ69 325 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 WACQ9BTA9 647 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 HSPB11Q9Y547 144 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 ANAPC1Q9H1A4 1944 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 EYSQ5T1H1 3165 aa17.08■□□□□ 0.32
ERCC2-201ENST00000391941 MANSC4A6NHS7 340 aaPredicted RBP17.07■□□□□ 0.32
ERCC2-201ENST00000391941 GTPBP1O00178 669 aaKnown RBP17.07■□□□□ 0.32
ERCC2-201ENST00000391941 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
ERCC2-201ENST00000391941 SLCO2B1O94956 709 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 ARAFP10398 606 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 PRKAG1P54619 331 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 GINS1Q14691 196 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 SYT14P1Q58G82 188 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 IQCHQ86VS3 1027 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 OTULINQ96BN8 352 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 ARSGQ96EG1 525 aa17.07■□□□□ 0.32
ERCC2-201ENST00000391941 DMRT3Q9NQL9 472 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms